Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0465 ATGGCGTGGAGGCGTTTGATAACGCAGGTAGCAAGGCCTCAATCAGAATTTAGACAGGTCAAAGATTTGTTGGTTAGGAGCTATTTATCTGTTAATAGGCTTGAAGGCCGTGCAGGGAATAGGCTTTTGGGTGCCCAGGAGAGATTCCGGTCCAGCTATGTTGGCAATTTGGCCCGTCGGGTACGTGAAGCAGATGAAGCGAGTGAAGTTGCTCATCTTAAAGAACTTTACCATCGAAATGATCCTGAAGCTGTGATTAGAGCATTTGAAAGTCAACCATCTCTTCACACTAATCCTTCAGCACTTTCTGAATACATTAAAGCATTAGTGAAAGTTGATAGACTAGATGAAAGTGAATTACTAAAGACTTTGCAGAGAGGCATTTCTAACTCAGTGAGGGAAGAACAAAGTATAGGTGGTTTTTCTGCAATTAGAAATGTGGGAAAACCTTCCAAAGATGGACTTCTTGGAACTGCCAGTGCTCCTATTCATATGGTGGCTACAGAAGGTGGGAATTTTAAAGAGCAGCTGTGGCGTACACTTAGGTCCATTCTAGTGGTCTTTCTCTTGGTTTCTGGCACAGGAGCCCTTATTGAGGATAAAGGAATCAGTAAAGGACTTGGTATGAGTGAAGAAGTTCAGCCCAGTGTTGAGTCAAGTACTAAATTTAACGATGTAAAAGGTGTTGATGAGGCAAAGGCAGAACTGGAAGAAATTGTTCACTACCTCCGAGACCCTAAGCGGTTTACTCGTCTTGGTGGTAAGCTCCCAAAAGGTGTCTTGCTTGTTGGTCCACCTGGAACTGGTAAAACGATGTTGGCTAGAGCTATTGCCGGAGAGGCTGGGGTTCCTTTCTTCTCATGCAGTGGAAGTGAATTTGAAGAGATGTTTGTTGGTGTTGGTGCACGAAGGGTGAGGGATCTTTTTTCTGCTGCTAAAAAGCGATCACCTTGTATAATCTTCATAGATGAGATCGATGCTATAGGAGGAAGCCGAAATCCAAAGGATCAAATGTACATGAAAATGACTCTGAATCAGTTACTAGTTGAGTTAGATGGATTCAAGCAAAATGAAGGCATAATTGTGATTGCAGCTACTAATTTTCCAGAGTCACTAGATAAGGCTTTAGTGAGACCTGGGCGGTTTGATCGCCATGTTGTTGTTCCCAATCCAGATGTTGAGGGGAGGCGGCAGATTTTGGAATCTCACATGTCAAAGGTTCTGAAGGCTGATGATGTTGATTTAATGATCATTGCTCGAGGAACACCTGGGTTCTCTGGTGCTGATCTTGCAAATTTGGTGAATGTTGCTGCTCTCAAGGCTGCAATGGATGGTGCCAAAGCTGTGAGCATGAATGATTTGGAATTTGCAAAGGACAAGATCATGATGGGAAGTGAGCGCAAGTCAGCTGTTATATCTGAGGAGTCAAGGAAGATGACTGCTTTTCATGAGGGTGGGCATGCCCTTGTGGCAATTCATACAGATGGAGCACTTCCTGTTCATAAGGCAACTATAGTTCCTCGAGGGATGACTCTTGGCATGGTTTCTCAGCTGCCTGACAAGGATCAGACCAGCATCTCACGTAAACAGATGCTTGCACGGCTTGATGTTTGCATGGGAGGTCGGGTTGCTGAAGAGCTAATTTTTGGAGAAACTGAAGTTACTTCTGGTGCATCCTCAGATCTTTCTCAGGCAACTGAACTTGCTAGGGCAATGGTTACTAAATATGGTATGAGCAATGAAGTCGGACTGGTCACCCACAATTACACTGATGATGGGAGAAGTATGAGCTCAGAAACTAGGCTGCTTATTGAGAAAGAGGTCAAGAACTTGCTGGAGACGGCCTACAATAATGCCAAAACTATTCTAACCACCCACAATAAGGAGCTTCATGCGCTTGCCAATGCCCTTCTGGAGCACGAGACACTCTCCGGAAGTCAGATAAAGGCTTTGCTTGCAAAACTTAAATCCCAACAGCAGCAGCAGAAACCCCAAACAGTTGAATCTCAGGGTAATTCCCGGTCCAATACGGCTGCCGCTGCAGCTGCAGCTGCCGCAGCGGCTGCAGCCACTGCTGCAGCCACGGCTCAAGGTGTTGCCCCGGTGGGATCTTAG 2115 0.4548 MAWRRLITQVARPQSEFRQVKDLLVRSYLSVNRLEGRAGNRLLGAQERFRSSYVGNLARRVREADEASEVAHLKELYHRNDPEAVIRAFESQPSLHTNPSALSEYIKALVKVDRLDESELLKTLQRGISNSVREEQSIGGFSAIRNVGKPSKDGLLGTASAPIHMVATEGGNFKEQLWRTLRSILVVFLLVSGTGALIEDKGISKGLGMSEEVQPSVESSTKFNDVKGVDEAKAELEEIVHYLRDPKRFTRLGGKLPKGVLLVGPPGTGKTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKRSPCIIFIDEIDAIGGSRNPKDQMYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHVVVPNPDVEGRRQILESHMSKVLKADDVDLMIIARGTPGFSGADLANLVNVAALKAAMDGAKAVSMNDLEFAKDKIMMGSERKSAVISEESRKMTAFHEGGHALVAIHTDGALPVHKATIVPRGMTLGMVSQLPDKDQTSISRKQMLARLDVCMGGRVAEELIFGETEVTSGASSDLSQATELARAMVTKYGMSNEVGLVTHNYTDDGRSMSSETRLLIEKEVKNLLETAYNNAKTILTTHNKELHALANALLEHETLSGSQIKALLAKLKSQQQQQKPQTVESQGNSRSNTAAAAAAAAAAAAATAAATAQGVAPVGS* 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0465 704 Gene3D - 391 464 - -
Aev08g0465 704 TIGRFAM FtsH_fam: ATP-dependent metallopeptidase HflB 186 652 IPR005936 GO:0004176|GO:0004222|GO:0016020
Aev08g0465 704 PANTHER METALLOPROTEASE M41 FTSH 8 685 - -
Aev08g0465 704 CDD AAA 257 389 - -
Aev08g0465 704 Gene3D Peptidase M41 465 663 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Aev08g0465 704 Pfam AAA+ lid domain 412 455 IPR041569 -
Aev08g0465 704 ProSitePatterns AAA-protein family signature. 360 378 IPR003960 GO:0005524|GO:0016887
Aev08g0465 704 SMART AAA_5 256 392 IPR003593 -
Aev08g0465 704 Hamap ATP-dependent zinc metalloprotease FtsH [ftsH]. 4 670 IPR005936 GO:0004176|GO:0004222|GO:0016020
Aev08g0465 704 Pfam Peptidase family M41 471 650 IPR000642 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Aev08g0465 704 PANTHER ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 4, MITOCHONDRIAL-LIKE 8 685 - -
Aev08g0465 704 MobiDBLite consensus disorder prediction 659 678 - -
Aev08g0465 704 Gene3D - 207 390 IPR027417 -
Aev08g0465 704 SUPERFAMILY FtsH protease domain-like 471 656 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Aev08g0465 704 Pfam ATPase family associated with various cellular activities (AAA) 260 389 IPR003959 GO:0005524|GO:0016887
Aev08g0465 704 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 221 484 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0465 Aev-Chr8 2617480 2620776 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0465 65 652 Miscellaneous Gene Families AT5G53170 52.700 0.0 581
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0465 K08955 - jre:109020493 1104.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0465 08 2617480 2620776 Aev08g0465 08 2617480 2620776 ECH