Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0453 ATGGCGGAAGAGGCACAGTATTCATCGGGAACGGAATCCACCCCCCTCAAGCGCAAGTTCGATTACGATGACCACTCCCCTGCCGCCGCACCTCCCCGCTCCACTGGCTTCTCCGCCGCACCCCCTCCCTCTTACAATTCCGTCCCTCCTCCTGCTGCCTCCGGCATCGAGCTCGCCAAGCAGCGCGCTCAGGAGGTCGCCGCTCGCCTCCTCAGCGGCGCCCCCGCCCCTCCCCTTGACACCAAGCGCCCTAAGGTCGACAACAACGGCGCCCCTCCCTCCTCCTTCGATTCCCCTGACGCAGATTTGAAGCCTCAATACTCGGCTCCTTCAGCTGCTCCTGTCTCGTACGGTCACCAGGGTACGAGCAAGAAGATCGAAATCCCGAATGGGAGGGTTGGTGTGATTATCGGTAAAGGAGGGGAGACTATCAAGTATCTTCAGCTGCAGTCTGGTGCTAAAATCCAAGTTACGCGTGACATGGACGCTGACCCTAATTCTTCCTCTAGGATGGTTGAGCTCATGGGTACTTCTGAAGCTATTGCCGCAGCTGAAAAACTCATCAATGAAGTCCTTGCAGAGGCTGAGGCTGGTGGTTCTGGCATTGCTGCTCGGAGACTCACAGGACAAACTGGATCAGATGAATTTTCGATGAAAATCCCGAATAATAAGGTCGGCCTTGTGATTGGTAAAGGAGGAGAAACGATAAAGAATATGCAAGCTTCAACTGGAGCACGTATTCAGGTGATTCCTCTGCATCTTCCTCCCGGCGACACATCATCTGAAAGAACGTTAAAAATTGATGGAACCCCTGACCAAATTGAGTCCGCAAAGCAGTTGGTTAATCAAGTCATCAGTGGTGAGAATCGTCTTAGAAATCCAGCAATGTCTGGCGGTTATTCTTCACAAGGTTACCAGGCTCGACCACCTTCTAGCTGGGCTCCCCCTGGTGCTCCTATGCAACAACCCAGTTATGGCTATGGGCAGCCTGGAGCATACTCTGGTCCTTCATCTCAATATAACATGCCTCAAGCACCATACGCAGGCTATCCTCCCCAACAGGCCAGTGGATATTCCACTAATTGGGACCAGTCCACTGCACCACCTCACCAGCAGTCTGCTCATGCTGGTGGTTATGATTACTATAGTCAACAGTCACACCAACAGCAAAATCTGGGGGGTCCTGCACCAACAGCTGATGGGTCTACATACAATTACAGTCAAGCACCTCCCTCTGGTTATAACCAACAAGGACAGGGTTATGCCCAGGACGGCTATAGTGCATATAATGTGGCACCACAATCAGGGTATGGTCAGCCATCGGCATATGATCAGCAACAAGGCTATAGCTCAGCTCCCAGTTATGGTAGTGGGGCTAACCCTGCCCAAGAGGGACACACTGCCAACTATGGATCACAGGGGGATTCAACCCAAGCACCATCTTCCCAACCCTCTACAATGGCCCAACAAGGTTATGCTACTAACCAACAGCCGAGCCCAAACACTGCCAATTATCCTCCGCAAGGAGCTCAGTCTGGTTATGGTATTCCCCCTACCTCCCAAGCAGCTTATGGTTATGGACCCGGTTATGGACCCCCACAAACCCAAAAGCCAGGTGGCACTCCACCTGTTTATGGACAATCCCAGTCACCTAGCACAGCTGCAGGAGGTTATGGGCAGTCAGGATATCCCCCTGCTCAGCCTCCTTCATCCGGGTATGCTCAACCAGAATCAGGCTCTCAAAGAGCACCACCAGGCAGTGCAGCACAACCAGGGTATGGTCCCCAATCATATGGTGCTCCTCCAGGGGGTCAACCTGGCTATGGACAGGCACCACCATACAGCAATAGTTCTTACGGTGCTGGTTATGCTCAGGCTCCTGCGTATGCTAGTGATGGAGCACCTGCACCAGCTGTTCAACAGGGTGGTGTCGCCAAAGCGTCACCTCAAAGTTGA 1956 0.5317 MAEEAQYSSGTESTPLKRKFDYDDHSPAAAPPRSTGFSAAPPPSYNSVPPPAASGIELAKQRAQEVAARLLSGAPAPPLDTKRPKVDNNGAPPSSFDSPDADLKPQYSAPSAAPVSYGHQGTSKKIEIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSSSRMVELMGTSEAIAAAEKLINEVLAEAEAGGSGIAARRLTGQTGSDEFSMKIPNNKVGLVIGKGGETIKNMQASTGARIQVIPLHLPPGDTSSERTLKIDGTPDQIESAKQLVNQVISGENRLRNPAMSGGYSSQGYQARPPSSWAPPGAPMQQPSYGYGQPGAYSGPSSQYNMPQAPYAGYPPQQASGYSTNWDQSTAPPHQQSAHAGGYDYYSQQSHQQQNLGGPAPTADGSTYNYSQAPPSGYNQQGQGYAQDGYSAYNVAPQSGYGQPSAYDQQQGYSSAPSYGSGANPAQEGHTANYGSQGDSTQAPSSQPSTMAQQGYATNQQPSPNTANYPPQGAQSGYGIPPTSQAAYGYGPGYGPPQTQKPGGTPPVYGQSQSPSTAAGGYGQSGYPPAQPPSSGYAQPESGSQRAPPGSAAQPGYGPQSYGAPPGGQPGYGQAPPYSNSSYGAGYAQAPAYASDGAPAPAVQQGGVAKASPQS* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0453 651 MobiDBLite consensus disorder prediction 327 344 - -
Aev08g0453 651 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 122 198 IPR036612 GO:0003723
Aev08g0453 651 MobiDBLite consensus disorder prediction 540 557 - -
Aev08g0453 651 PANTHER K DOMAIN-CONTAINING PROTEIN-RELATED 65 634 - -
Aev08g0453 651 MobiDBLite consensus disorder prediction 1 15 - -
Aev08g0453 651 SMART kh_6 120 193 IPR004087 GO:0003676
Aev08g0453 651 SMART kh_6 212 286 IPR004087 GO:0003676
Aev08g0453 651 CDD KH-I 123 188 - -
Aev08g0453 651 MobiDBLite consensus disorder prediction 564 585 - -
Aev08g0453 651 MobiDBLite consensus disorder prediction 292 309 - -
Aev08g0453 651 MobiDBLite consensus disorder prediction 1 124 - -
Aev08g0453 651 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 209 287 IPR036612 GO:0003723
Aev08g0453 651 Pfam KH domain 217 282 IPR004088 GO:0003723
Aev08g0453 651 Pfam KH domain 124 190 IPR004088 GO:0003723
Aev08g0453 651 PANTHER KH DOMAIN CONTAINING RNA BINDING PROTEIN 65 634 - -
Aev08g0453 651 ProSiteProfiles Type-1 KH domain profile. 213 281 - -
Aev08g0453 651 ProSiteProfiles Type-1 KH domain profile. 121 188 - -
Aev08g0453 651 MobiDBLite consensus disorder prediction 292 651 - -
Aev08g0453 651 MobiDBLite consensus disorder prediction 353 518 - -
Aev08g0453 651 Gene3D K Homology domain, type 1 116 208 IPR036612 GO:0003723
Aev08g0453 651 Gene3D K Homology domain, type 1 209 311 IPR036612 GO:0003723
Aev08g0453 651 CDD KH-I 215 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0453 Aev-Chr8 2548865 2553774 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0453 K13210 - gmx:100813135 814.683