Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0452 ATGAACGCTGCCATCTATTCCGCCGTTGTTTCCCATCCTAATTTCCAATGTTTGGATCGCAAGTTTTCAGCGTCATATTCTGCTACCACAAGTGTTGCTAGTGTCACTTGCTACTCGGATCCTAACAAGTCAACATCGCAAGCATCCTTGTTTTTGTCCCCTAGCTCAACTATTGGAAGGAATGGAATGCTTGCTGGACCTTCTTGGGACCCCTTGGGCAGGAGAAACCTAGTTGCTCAGATTTCTTATTCTGTGGGTACAAGTACCTACCATGGAACCACTACTGAATCTCCTACCCATGTTGCGGAAGAGAAAGTTGGGGTGCTACTTCTCAACTTGGGAGGACCAGAGACACTGAATGATGTTCAACCTTTTCTATTCAATCTCTTTGCTGATCCTGATATCATTCGTCTGCCAAGGTTGTTTCGGTTCCTTCAGAGACCACTCGCAAAATTGATTTCGGTGCTTCGGGCTCCTAAATCCAAGGAAGGGTATGCTGCTATTGGAGGTGGATCCCCTTTACGCAAAATCACAGATGACCAGGCACTTGCAATTAAAATGGCTTTGGAAGCAAAGGGTCTCTCCTCAAATGTCTATGTTGGGATGCGGTACTGGTACCCATTCACTGAAGAAGCAGTTCAACAAATTAAGAGAGATGGAATAACCAGGCTTGTGGTGCTGCCTCTGTATCCCCAGTTTTCTATATCCACAACTGGGTCTAGCATCCGTGTTCTTCAACAAATGTTCAGGGAAGATGCTTATTTGTCGAGGCTTCCTGTTTCAATTATAAACTCTTGGTACCAACGACAAGGTTACATCAATTCAATGGCTGACTTAATTGAGAAAGAGCTACAGAGTTTTTCTGAACCGAAGGAGGCGATGATATTTTTTAGTGCCCACGGTGTACCTGTCAGTTATGTTGAGGAAGCTGGTGATCCATACCGAGATCAAATGGAGGAGTGTATTTTCTTGATCATGCAGGAGTTGAAGGCTAGAGGAATTACCAACGAGCACACTCTTGCTTATCAGAGTCGAGTGGGTCCCGTACAGTGGCTTAAACCGTATACAGATGAAGTTCTCGTTGAGCTGGGCCAGAAAGGTGTGAAGAGTCTTTTAGCTGTTCCAGTGAGCTTTGTGAGTGAGCACATTGAGACCCTTGAAGAAATAGACATGGAGTACAGGGAGTTGGCTCTTGAGTCTGGCATCGAGAATTGGGCACGTGTTCCTGCCCTTGGCCTCACCCCTTCCTTCATCACAGATCTGGCAGATGCTGTAGTAGAAGCTCTCCCATCAGCAACAGCAATGTATGCACCAACAAGCACTTCTGAAGCAGTTGATCATGACCCCATCAGATATTTGATCAAGATGTTCTTTGGCTCGATCTTGGCATTCTTCTTGTTCCTGTCACCTAAAATGATAACGGCATTCAAGAATCACGTCATATAG 1446 0.4537 MNAAIYSAVVSHPNFQCLDRKFSASYSATTSVASVTCYSDPNKSTSQASLFLSPSSTIGRNGMLAGPSWDPLGRRNLVAQISYSVGTSTYHGTTTESPTHVAEEKVGVLLLNLGGPETLNDVQPFLFNLFADPDIIRLPRLFRFLQRPLAKLISVLRAPKSKEGYAAIGGGSPLRKITDDQALAIKMALEAKGLSSNVYVGMRYWYPFTEEAVQQIKRDGITRLVVLPLYPQFSISTTGSSIRVLQQMFREDAYLSRLPVSIINSWYQRQGYINSMADLIEKELQSFSEPKEAMIFFSAHGVPVSYVEEAGDPYRDQMEECIFLIMQELKARGITNEHTLAYQSRVGPVQWLKPYTDEVLVELGQKGVKSLLAVPVSFVSEHIETLEEIDMEYRELALESGIENWARVPALGLTPSFITDLADAVVEALPSATAMYAPTSTSEAVDHDPIRYLIKMFFGSILAFFLFLSPKMITAFKNHVI* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0452 481 TIGRFAM hemH: ferrochelatase 103 428 IPR001015 GO:0004325|GO:0006783
Aev08g0452 481 Gene3D - 105 430 - -
Aev08g0452 481 Hamap Coproporphyrin III ferrochelatase [cpfC]. 104 429 IPR001015 GO:0004325|GO:0006783
Aev08g0452 481 Pfam Ferrochelatase 105 428 IPR001015 GO:0004325|GO:0006783
Aev08g0452 481 CDD Ferrochelatase_N 106 268 IPR033659 -
Aev08g0452 481 PANTHER FERROCHELATASE 52 480 IPR001015 GO:0004325|GO:0006783
Aev08g0452 481 ProSitePatterns Ferrochelatase signature. 295 314 IPR019772 GO:0004325|GO:0006783
Aev08g0452 481 Gene3D - 267 410 - -
Aev08g0452 481 CDD Ferrochelatase_C 276 412 IPR033644 -
Aev08g0452 481 PANTHER FERROCHELATASE-1, CHLOROPLASTIC/MITOCHONDRIAL 52 480 - -
Aev08g0452 481 SUPERFAMILY Chelatase 104 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0452 Aev-Chr8 2545353 2548148 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0452 K01772 - gmx:100813423 761.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0452 08 2545353 2548148 Aev08g0452 08 2545353 2548148 ECH