Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0387 ATGTGGAATCCAACATCTTTTGCTGCTGCTAACGAGGTTGAAACCTCGTCAGCGCGGTCATCGTTATTGTCCCTTCCATCTTGGTTGTTGTGCCGTCAGTCTGTGACGCCGAATAACCAAAACCCTCTTAATGAGAGCCAAACCCTAGAGGAGGCTTTTGCTCGTCTCTCACTATCCATGTCCAGCTTTGATCCACCTTCTCTTGATTTCGATCGGGATGGTTGGACCGGAATCAATATTGGTTCAAAGTCTGATCCTTTTGATCTCCTTGGTTTCAACCACAATGAACAAAGACCAATATCATCAATGGGACAGGTTCAACCACAATGGAACAGTATCATCGGCAGCAAGTTCAACAGTGTAGATTCTCATCAGAATTCAGGTGACGGTGGGCAATGGAACAACTTTTGGTCCGGTTCTGGCGGGTACATGTCTTCCGCCAGCTTGGGTAAGTTTCTCGATTCTGAGCCTTCACTGAGGCAGAATGGTCTAGGGATAGGTTTACCGAGTGTATCACTTTCGAATGGGGTTGTCGGTGAATTGTTGCAACGAAATAATTCGAGTGTTAATAATAATGGTGCCTTGAATAATGAGTTCATGGTGAACAACGAATCGAGGTTGAATGATAATGGAATGGTCTCATTCCGTCTGAGTAATCTGCAAGGGAGGATTGTGTTGTTGGCTAAGGATGAAGAGGGTAGCCGTGCTCTGAAGGACATGATGCAACTCTTGACACCGGGCCTGGTTGATTTCTTCTTCTCGGAGTTGATTAATGATATTGCTGACTTGATGGTTGACCCTTTCGGGAATCATGTGGTTCAGAGGCTGGTGGAAATCTGCGATGAGCAACAGAGGAATGCCATCATTGGAATGATCCTCAACAACAAAGTGCAGTTCCTCAAAATATGTCTTAACCCCCTCGGGGTCCGTGCTGTGGAGAAAGTATTGGAGCATGTTACTACTCAGCTCCAGCGAACTTCAATCGTGATTGGTCTCATTCCCGGTGTTGCTGCTCTGGCTAAGGATGTTAATGGTCATCGAGTCATTCTGCATTGTCTTAAACATTTTCCACAGGGAGATAGCAAGCACCTTTTTGCAGCTGTTGCTTCCAACTGCTTTGGGATCGCAACGGATAAGACTGGATGCTGTATGCTACAGGAGTGCGTGAGATATGCTGAGGGACAAACCAAATTGGAGCTTATTTCTGAGATCATTGCCAATGTTTCATTCCTTGCAGAAGACTGCTATGGGAACTATGTTGTGCAGCATCTGCTGTCTCTGAAAGTAGCTGGAGTGACAGAGTGCGTGCTGAGGAGGCTTGAAGGGACATTCTTCCATCTCTCATCCAATAAGTATGGAAGCAATGTTGTGGAGAAGTTCTTTCAATTCTCAGACGACCTCCATAGCGCTCGTATCATTACCGAGTTGCTTTATCATCCCAATGTCGCTATGCTTCTTGTCGATCCATATGGAAACTATGTCATGCAAACAGCACTCATGGTCTCCAAGGGAAATATGCGCGCTTACTTGGTGAATCTGATCCAACATAATTCTCCAATGATGCGTTATAATACCTACGGCAAGAAGGTACTTGAAAGGTTCTACAGGGTTACTAAGCTACCCGGCACACTTAACCGTGTTTTGCTGCCCCAAAACTAA 1659 0.4557 MWNPTSFAAANEVETSSARSSLLSLPSWLLCRQSVTPNNQNPLNESQTLEEAFARLSLSMSSFDPPSLDFDRDGWTGINIGSKSDPFDLLGFNHNEQRPISSMGQVQPQWNSIIGSKFNSVDSHQNSGDGGQWNNFWSGSGGYMSSASLGKFLDSEPSLRQNGLGIGLPSVSLSNGVVGELLQRNNSSVNNNGALNNEFMVNNESRLNDNGMVSFRLSNLQGRIVLLAKDEEGSRALKDMMQLLTPGLVDFFFSELINDIADLMVDPFGNHVVQRLVEICDEQQRNAIIGMILNNKVQFLKICLNPLGVRAVEKVLEHVTTQLQRTSIVIGLIPGVAALAKDVNGHRVILHCLKHFPQGDSKHLFAAVASNCFGIATDKTGCCMLQECVRYAEGQTKLELISEIIANVSFLAEDCYGNYVVQHLLSLKVAGVTECVLRRLEGTFFHLSSNKYGSNVVEKFFQFSDDLHSARIITELLYHPNVAMLLVDPYGNYVMQTALMVSKGNMRAYLVNLIQHNSPMMRYNTYGKKVLERFYRVTKLPGTLNRVLLPQN* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0387 552 Pfam Pumilio-family RNA binding repeat 260 292 IPR001313 GO:0003723
Aev08g0387 552 Pfam Pumilio-family RNA binding repeat 481 512 IPR001313 GO:0003723
Aev08g0387 552 Pfam Pumilio-family RNA binding repeat 445 477 IPR001313 GO:0003723
Aev08g0387 552 Pfam Pumilio-family RNA binding repeat 336 368 IPR001313 GO:0003723
Aev08g0387 552 Pfam Pumilio-family RNA binding repeat 411 425 IPR001313 GO:0003723
Aev08g0387 552 Pfam Pumilio-family RNA binding repeat 298 329 IPR001313 GO:0003723
Aev08g0387 552 Pfam Pumilio-family RNA binding repeat 371 405 IPR001313 GO:0003723
Aev08g0387 552 ProSiteProfiles Pumilio RNA-binding repeat profile. 255 290 IPR001313 GO:0003723
Aev08g0387 552 SUPERFAMILY ARM repeat 210 533 IPR016024 -
Aev08g0387 552 PANTHER PUMILIO HOMOLOG 15 44 533 - -
Aev08g0387 552 ProSiteProfiles Pumilio RNA-binding repeat profile. 403 438 IPR001313 GO:0003723
Aev08g0387 552 CDD Pumilio 214 533 IPR033712 GO:0003723
Aev08g0387 552 ProSiteProfiles Pumilio homology domain (PUM-HD) profile. 195 538 IPR033133 GO:0003723
Aev08g0387 552 ProSiteProfiles Pumilio RNA-binding repeat profile. 439 474 IPR001313 GO:0003723
Aev08g0387 552 Gene3D - 201 540 IPR011989 -
Aev08g0387 552 PANTHER RNA BINDING PROTEIN PUMILIO-RELATED 44 533 - -
Aev08g0387 552 ProSiteProfiles Pumilio RNA-binding repeat profile. 475 512 IPR001313 GO:0003723
Aev08g0387 552 SMART pum_5 294 330 IPR001313 GO:0003723
Aev08g0387 552 SMART pum_5 403 438 IPR001313 GO:0003723
Aev08g0387 552 SMART pum_5 331 366 IPR001313 GO:0003723
Aev08g0387 552 SMART pum_5 439 474 IPR001313 GO:0003723
Aev08g0387 552 SMART pum_5 367 402 IPR001313 GO:0003723
Aev08g0387 552 SMART pum_5 255 290 IPR001313 GO:0003723
Aev08g0387 552 SMART pum_5 219 254 IPR001313 GO:0003723
Aev08g0387 552 SMART pum_5 477 512 IPR001313 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0387 Aev-Chr8 2133884 2136880 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0387 - - adu:107461162 440.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0387 08 2133884 2136880 Aev08g0387 08 2133884 2136880 ECH