Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0359 ATGGCTCTTCCTGAGCACCACTTCCTACGACACTACCAACCAGAACCTTCAAAATCGAAACCTTTCATAAATCTACACACAATTGACTTTGACGGTCAGATGTCGCAACAGCCCATCTCCTATTTCAACCCTACCGATTTGCAGCATCCTCCCTTTGATGTTTTAGGGCTTGCTCCGGCTGGCGGCGGCGATGGGAGTGGTGCTGATTTGCAATGGGGTTACGGTTTGGAGCGCGAGAGTAAAAGACTGAAAGAACATGATTTTCTGGAGAACAATTCTCAGGTGTCTTGTGTGGATTTCATGCAACTTCGATCGGTCTCCACTGGATTAGGTTTGTCACTTGACAATACCCGCGTGTCTTCCACTGGAGATTCAGCTTTACTGTCTCTCATTCGCGAAGACATTGATCGTGAGTTACTGCAGCAGGATGCTGAGATTGATAGATTTCTCAGAATCCAGGGTGAAAGATTGCGGGAAGCCATTCTGAGGAAAGTTCAGGCAACGCAACTTCAGACCCTTTCTATCATTGAAGACGAAGTCATTCAGAAACTTCGTGAGAAAGAAGCAGAGGTAGAAAGCATCAATAAGAAGAATATAGAACTTGAGGAGCGAATGGAGCATTTGACTGCTGAAGCAGATGTCTGGCAACAGCGAGCTAGATACAACGAGAACATGATTTCTGCTTTGAAGTTTAACCTTCAGCAAGTATATGTCCAAAGCAGAGACAGCAAAGAGGGGTGCGGTGACAGTGAGGTAGATGATACAGCTTCATGCTTCAATGGTCGTCCAATTGATTTTCAACTGCTATCCGGAGAGAACAACATGAAGGAGATGATGACATGCAAGGCCTGCAGAGTCAACAAAGTTACCGTGCTTTTATTTCCATGTAAGCATCTCTGCCTCTGTAGAGATTGTGAAAATAAGCTGAGCTTTTGTCCTATGTGTCAGTCCTCAAAATTTTTCGGCATGGAGGTCTATATGTAA 984 0.4482 MALPEHHFLRHYQPEPSKSKPFINLHTIDFDGQMSQQPISYFNPTDLQHPPFDVLGLAPAGGGDGSGADLQWGYGLERESKRLKEHDFLENNSQVSCVDFMQLRSVSTGLGLSLDNTRVSSTGDSALLSLIREDIDRELLQQDAEIDRFLRIQGERLREAILRKVQATQLQTLSIIEDEVIQKLREKEAEVESINKKNIELEERMEHLTAEADVWQQRARYNENMISALKFNLQQVYVQSRDSKEGCGDSEVDDTASCFNGRPIDFQLLSGENNMKEMMTCKACRVNKVTVLLFPCKHLCLCRDCENKLSFCPMCQSSKFFGMEVYM* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0359 327 PANTHER F2G19.2 1 327 - -
Aev08g0359 327 Pfam Zinc finger, C3HC4 type (RING finger) 279 317 - -
Aev08g0359 327 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 268 327 IPR013083 -
Aev08g0359 327 ProSiteProfiles Zinc finger RING-type profile. 281 316 IPR001841 -
Aev08g0359 327 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 1 327 IPR017066 -
Aev08g0359 327 Coils Coil 177 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0359 Aev-Chr8 1940450 1942173 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0359 281 317 Miscellaneous Gene Families AT4G39050 40.541 2.95e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0359 K19042 - gmx:100811918 468.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0359 08 1940450 1942173 Aev08g0359 08 1940450 1942173 ECH