Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0349 ATGAAGATGGGTTGTAGTGTTGGGTGCAGCATCATAACCAGAACTGCCCCTAATCTTTCATTCTTCCACTCTCTGCTCCAGAATGAGAACGCAAGATGGCCACTTGTTATCTTTCGTCAGCTCTTGGAGGCTAATGTCGACCCCAACCATCTCACTTTCTCCTTTCTCATCAAATCATGCGTTTTGTCTTCTTATTCTTGTGGTTCATCCACTGCGGGTCTTCAAGTGAGCCAGATCCAGACCCAGTTGCTGAAACGGGGTACCAACCAATTTGTTTATGTAAATACTGCTCTCCTCGATTTCTGCATGAAACTGGGGTTCACCACTCATGCACGCCATCTGTTTGATGATATGCCTCACAGAGATGTTGTCTCATGGAACGTGTTGATTTGTGGATATTCACAAAATGGGCTTCCTTATGATGCTCTGCAACTCTTTGTACACATGCTTAGACAGGGTTTCGCACCTAATCATACTACCATTGCTAGTTTAGTACCTGCCCTTGGTCGCCATGACCTGGTTCTTCAAGGGAGATCAATTCACGGGTTTGGAATCAAAGCCGGCCTTGGTTCGGATCCTCAAGTGAATAATGCCCTTACTTCGATGTATGCTAAATGCGATGACTTGGAAGCATCCCAAGTCTTATTTGGAGAAATGGATGACAGGAATGTTGTCTCTTGGAACACCGTGATTGGTGCCTATGGCCAAAATGGTTTCTCGGGCAAGGCAATGCTTTGCTTCAAAGAGATGCTAAAGGAAGGTTTGCAACCTAGTCCTGTGACAATGATGAACCTTCTCTCAGCAAATGCAGTTCCAGAAACTATCCATTGTTATATTATCAAATGTGGCTTGACCAACAATGCTTCTGTTGTTACTTCGCTAGTTTGTCTATATGCAAAGCAAGGGTTGACAGATGTGGCAAAATTGCTTTACAAGTGTTTTCCCTCAAAAGATCTAATTTGCTTAACTGCCATAGTATCTAGCTATTCTGATAAAGGTGATATAGATTCAGCAGTTGAGTGTTTTGTACAAACTCTGCAGTTAGACATTAAACCAGATGCAGTTGCCTTGATTAGTGTCCTTCATGGAATTACTAATCCTTCTCATTTTGTTGTTGGATGTGCTTTTCATGGTTATGGATTGAAAAGTGGGCTGATTACCGACTGCTTAGTCGCAAACGGGCTGATAAGCATGTATTCTAGATTCGATGAGGTAGAAGCTTCCTTGTCTTTGTTTTCGGATGTGAGTGAAAAAACGCTGATCACTTGGAACTCTGTGATATCTGGCTGTGTGCAGGCTGGAAAATCAAGTGATGCCATGGAGTTGTTCTTCAAAATGACCATGTGTGGACAAAAACCGGATGCCATTACTATAGCTAGCTTACTCTCTGGGTGTTGCCAGCTCGGGTACCTTCGGGTTGGGGAGACACTCCATGCCTACATCCTGAGGAATCACGTGAAAGTGGAAGATTTTACCGGAACTGCTCTAATAGATATGTATACTAAGTGTGGAAGATTAGACTATGCTGAAAAGGTCTTTGGCAGAATCCATGACCCATGCTTGGCAACATGGAACTCTATCATATCAGGTTATAGTTTATATGGACACGAACATAAAGCTTTCAGCTCTTATTCTAAACTGCAAGAGCAAGGGATAAAACCAGATAAAATAACCTTCTTGGGAGTTTTAGCAGCATGCACACATGGGGGACTTGTCTGTGAAGGAATAGAATACTTCCGTATAATGACAGAAGAGCATGGATTGATACCAAGTTTGCAACATCATGCTTGCATAGTTGGTCTGTTGGGTAGGGCAGGCTTGTTTAAGGAAGCAATTGAGTTCATTAACAACATGGAGACTCGACCTGATTCTGCTGTCTGGGGAGCTCTGTTAAGTGCTTGTTTTATCGAACAAGAGATCAAGCTTGGGGAATGCTTGGCGAAAAAATTGTTTTTCTTGAATCACAAAAACGGTGGATTATATGTATTAATGTCAAATATTTATGCTATTGTTGGGAGGTGGGATGATGTAGCAAGGGTGAGGGATATGATGAGAGACAGTGGAGGAGATGGATGTTCTGGAGTTAGTGTCATTCAAGTGTTATCCCCTAATAATCACATGAATAACAACAAATTGCCCCTTAATGAAGTTTATATGAATAATAATACTACTTGGCAGCATTTGTGTCTATATTGA 2196 0.4199 MKMGCSVGCSIITRTAPNLSFFHSLLQNENARWPLVIFRQLLEANVDPNHLTFSFLIKSCVLSSYSCGSSTAGLQVSQIQTQLLKRGTNQFVYVNTALLDFCMKLGFTTHARHLFDDMPHRDVVSWNVLICGYSQNGLPYDALQLFVHMLRQGFAPNHTTIASLVPALGRHDLVLQGRSIHGFGIKAGLGSDPQVNNALTSMYAKCDDLEASQVLFGEMDDRNVVSWNTVIGAYGQNGFSGKAMLCFKEMLKEGLQPSPVTMMNLLSANAVPETIHCYIIKCGLTNNASVVTSLVCLYAKQGLTDVAKLLYKCFPSKDLICLTAIVSSYSDKGDIDSAVECFVQTLQLDIKPDAVALISVLHGITNPSHFVVGCAFHGYGLKSGLITDCLVANGLISMYSRFDEVEASLSLFSDVSEKTLITWNSVISGCVQAGKSSDAMELFFKMTMCGQKPDAITIASLLSGCCQLGYLRVGETLHAYILRNHVKVEDFTGTALIDMYTKCGRLDYAEKVFGRIHDPCLATWNSIISGYSLYGHEHKAFSSYSKLQEQGIKPDKITFLGVLAACTHGGLVCEGIEYFRIMTEEHGLIPSLQHHACIVGLLGRAGLFKEAIEFINNMETRPDSAVWGALLSACFIEQEIKLGECLAKKLFFLNHKNGGLYVLMSNIYAIVGRWDDVARVRDMMRDSGGDGCSGVSVIQVLSPNNHMNNNKLPLNEVYMNNNTTWQHLCLY* 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0349 731 Pfam PPR repeat family 420 467 IPR002885 -
Aev08g0349 731 Pfam PPR repeat family 222 267 IPR002885 -
Aev08g0349 731 Pfam PPR repeat family 121 168 IPR002885 -
Aev08g0349 731 PANTHER OS07G0578800 PROTEIN-RELATED 216 312 IPR045215 GO:0003723|GO:0009451
Aev08g0349 731 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 122 156 IPR002885 -
Aev08g0349 731 Pfam PPR repeat 494 516 IPR002885 -
Aev08g0349 731 Pfam PPR repeat 523 552 IPR002885 -
Aev08g0349 731 TIGRFAM PPR: pentatricopeptide repeat domain 225 258 IPR002885 -
Aev08g0349 731 TIGRFAM PPR: pentatricopeptide repeat domain 124 157 IPR002885 -
Aev08g0349 731 TIGRFAM PPR: pentatricopeptide repeat domain 421 455 IPR002885 -
Aev08g0349 731 TIGRFAM PPR: pentatricopeptide repeat domain 523 555 IPR002885 -
Aev08g0349 731 Pfam E motif 639 699 IPR046848 -
Aev08g0349 731 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 520 554 IPR002885 -
Aev08g0349 731 PANTHER PPR CONTAINING PLANT-LIKE PROTEIN 216 312 - -
Aev08g0349 731 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 318 352 IPR002885 -
Aev08g0349 731 Gene3D Tetratricopeptide repeat domain 184 276 IPR011990 GO:0005515
Aev08g0349 731 Gene3D Tetratricopeptide repeat domain 277 370 IPR011990 GO:0005515
Aev08g0349 731 Gene3D Tetratricopeptide repeat domain 24 183 IPR011990 GO:0005515
Aev08g0349 731 Gene3D Tetratricopeptide repeat domain 372 518 IPR011990 GO:0005515
Aev08g0349 731 Gene3D Tetratricopeptide repeat domain 519 712 IPR011990 GO:0005515
Aev08g0349 731 PANTHER OS07G0578800 PROTEIN-RELATED 314 729 IPR045215 GO:0003723|GO:0009451
Aev08g0349 731 PANTHER OS07G0578800 PROTEIN-RELATED 57 221 IPR045215 GO:0003723|GO:0009451
Aev08g0349 731 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 223 257 IPR002885 -
Aev08g0349 731 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 419 453 IPR002885 -
Aev08g0349 731 PANTHER PPR CONTAINING PLANT-LIKE PROTEIN 314 729 - -
Aev08g0349 731 PANTHER PPR CONTAINING PLANT-LIKE PROTEIN 57 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0349 Aev-Chr8 1873153 1875348 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0349 49 697 Glycoside Hydrolase AT3G49170 30.493 6.75e-102 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0349 - - adu:107460366 1175.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0349 08 1873153 1875348 Aev08g0349 08 1873153 1875348 ECH