Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0297 ATGGCGCTTACTACAAACTCAAAATCCTTTTCATTCCTCCTCCTCTTAATCCTATTAGGTAATGTAGCATCATGCACTTTGTTCACACTAGAAAACCGTTGCACCTACACTGTCTGGCCGGGAACTCTTTCCGGCAACGGCGCCGCCCTTCTCGGTGACGGCGGATTCTCCCTCCCGCCGGGATCTTCCATTCAGTTCACCGCTCCCTCCGGCTGGTCAGGGCGATTCTGGGCCCGAACCGGCTGCAGCTTCGACGGCGCCGGCAACGGCAAATGCATCACCGGAGACTGCCCCGGCGGGCTCAGGTGCACCGGAGGAGGCACTCCGCCTGTGACGCTGGTGGAGTTCACGATCGGAACCGCCAGCAACGGAGACAAGGACTTCTACGACGTGAGCCTCGTTGACGGTTACAATGTTGGGATGGGAGTACGGGCAACCGGTGGAAGCGGTGACTGCCAGTACGCGGGATGCGTTGCGGACTTGAACGGTAACTGCCCCAGGGAGTTGCAGGTGACCGACGAGGTGGGCGGTGTGGTGGCGTGCAAGAGCGCGTGCGCGGCGTTCAACACGGCGGAGTTCTGCTGCACCGGGGAGTTCTCGACGCCGCAGAGTTGCAGGCCAACGCAATACTCAGAGATGTTCAAGAATGCGTGCCCCTCTGCTTACAGTTACGCTTATGATGATGCTTCCAGCACTTGCACCTGCTCTGGCTCCGATTACCTCATCACATTTTGTCCTTCCGGGTCTTCCTAG 753 0.5883 MALTTNSKSFSFLLLLILLGNVASCTLFTLENRCTYTVWPGTLSGNGAALLGDGGFSLPPGSSIQFTAPSGWSGRFWARTGCSFDGAGNGKCITGDCPGGLRCTGGGTPPVTLVEFTIGTASNGDKDFYDVSLVDGYNVGMGVRATGGSGDCQYAGCVADLNGNCPRELQVTDEVGGVVACKSACAAFNTAEFCCTGEFSTPQSCRPTQYSEMFKNACPSAYSYAYDDASSTCTCSGSDYLITFCPSGSS* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0297 250 PIRSF PR5 1 250 IPR001938 -
Aev08g0297 250 PANTHER PATHOGENESIS-RELATED PROTEIN 5 23 246 - -
Aev08g0297 250 Pfam Thaumatin family 32 246 IPR001938 -
Aev08g0297 250 ProSitePatterns Thaumatin family signature. 88 103 IPR017949 -
Aev08g0297 250 SMART tha2 28 246 IPR001938 -
Aev08g0297 250 Gene3D Thaumatin 26 246 IPR037176 -
Aev08g0297 250 CDD TLP-PA 28 245 - -
Aev08g0297 250 PANTHER OS03G0233200 PROTEIN 23 246 IPR001938 -
Aev08g0297 250 SUPERFAMILY Osmotin, thaumatin-like protein 27 247 IPR037176 -
Aev08g0297 250 PRINTS Pathogenesis-related protein signature 27 39 IPR001938 -
Aev08g0297 250 PRINTS Pathogenesis-related protein signature 88 117 IPR001938 -
Aev08g0297 250 PRINTS Pathogenesis-related protein signature 236 245 IPR001938 -
Aev08g0297 250 PRINTS Pathogenesis-related protein signature 75 86 IPR001938 -
Aev08g0297 250 ProSiteProfiles Thaumatin family profile. 28 248 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0297 Aev-Chr8 1623814 1624691 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0297 7 250 Receptor kinase-like Gene Family AT5G38280 46.215 5.21e-63 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0297 - - gmx:100809378 409.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0297 08 1623814 1624691 Aev08g0297 08 1623814 1624691 ECH