Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0245 ATGGGCGTCAACAACAACAACAACAAGCTTATTCTGTTGACATTCGCAATATGCCGTCTGATAGTAACGGTTGGGTTAACGGTGGTCCCAACGGAGCTGCTCCGCGTAGGAGTGCTTGACGGTCAACTGAGCGTTGACACGGCAGAAGTGGAAGCCGCTTCGGTGGATTTCGGGTTGATGACTCGAGGTGAGCCTGTGGCGGTTATGCACCCAGGCTCAGCGGATGACGTGGCCAGGGTGGTTAGAGCGGCGTACGGATCAGGTGGGTTGGCGGTGTCGGCGAGAGGGCACGGGCACTCCATAAACGGGCAGGGGTTGATAAAGGGAGGGACGAAGGGGGTGGTGATCGAGATGGGGAAGGGTGGGCTCGGGCTCGGGCTCGGGCCTCGAGTGAGTGAGGAGGGAATGTACGTGGACGTGTGGGGAGGTGAGCTGTGGATAGAGGTGTTGAGGGCAACACTGCACTATGGTTTGGCGCCAATGTCTTGGACCGACTACTTGTACTTGTCTGTGGGTGGAACCCTTTCCAACGCTGGCATTAGTGGTCAGACCTTCTATCACGGTCCTCAGATTGCCAATGTTCATCAGCTCGATGTCGTTACAGGAAAGGGCGAGCTGTTGACGTGTTCAGAAGAGAGTAACTCGGAGTTGTTCCATGCTGTTCTTGGTGGCCTAGGACAATTTGGAATCATCACGAGGGCTAGAATTGCTCTCGAACCAGCTCCTCACAGGGTTCGTTGGATAAGAGTACTGTACTCGAATTTTGCAACATTTACTAAGGACCAGGAGTTTCTGATCTCTCTGCAAGGGAGGGAGAGGTTCGACTATGTTGAGGGTTTTGTGATCGTTGATGAAGGACTCATCAATAATTGGAGGTCCTCCTTTTTTTCACCTAGTAACCCTGTCAAAATCAGTTCACTCAAAGCTGATGGAGGAGGTGTTTTATACTGCTTGGAGATTACCAAAAATTACCAACAACATAACGCAGATTCTGTTGATCAGGAAATAGAGGCTCTATTGAAAAAGTTAGATTTTATACCAGCATCGGTGTTCACAACGGACCTGCCTTATGTGGATTTTTTGGACAGAGTACATAAAGCAGAGCTCAAGCTTAGAGCCAAAGGTTTATGGGAAGTTCCACATCCATGGCTCAACCTTTTTGTCCCAAAATCAAGGATACAGGATTTTGACAAGGGTGTGTTCAAGGGTATTTTGGGAAATAAGACTAGTGGGCCAATTCTCATCTACCCCATGAACAAAAACAAGTGGGACCAGCGGAGCTCGGCGGTGACACCAGAGGAGGAAGTGTTTTACCTGGTGGCGTTTCTGAGATCAGCCTTGGATACTGAGACGCTGGAGTACCTGAGCGATCAGAACCGTCAGATCCTGAGATTCTGCCATGATGCGGAGATCAAGGGAGGAATTAGGAGGAGGGTTTTTTGTTTTCTTTTGAACGGTGACGGTGGAGGTGGAGGTGGAGGAGCGGTTGAGGTGTTGCTATCTGGGGATGGGCTAGGAAGGGAGGTTGAGCCCCAGCAAGGGAGTGGTGGGGCCCACATGTGGGGAAAAAGGACTATGTCGCAGGCAGTGCGCAATGCACATGACATGTCGCAGCTCAGCGCCCGTGATCCCGACCGCCCGTCCGATTTGGTTTCGTTGTCACGTCGGTCCACAACACACCCTGCTCATCACCTCTTCGTCCCATTTTCACTGTTTCTTGTTTTACCCTTCCAAATTCCTTGTACATATAAAATTCTTCTTAGATATGTTAGGGTTCAATTGAAGCTCTACGGCACATAG 1800 0.505 MGVNNNNNKLILLTFAICRLIVTVGLTVVPTELLRVGVLDGQLSVDTAEVEAASVDFGLMTRGEPVAVMHPGSADDVARVVRAAYGSGGLAVSARGHGHSINGQGLIKGGTKGVVIEMGKGGLGLGLGPRVSEEGMYVDVWGGELWIEVLRATLHYGLAPMSWTDYLYLSVGGTLSNAGISGQTFYHGPQIANVHQLDVVTGKGELLTCSEESNSELFHAVLGGLGQFGIITRARIALEPAPHRVRWIRVLYSNFATFTKDQEFLISLQGRERFDYVEGFVIVDEGLINNWRSSFFSPSNPVKISSLKADGGGVLYCLEITKNYQQHNADSVDQEIEALLKKLDFIPASVFTTDLPYVDFLDRVHKAELKLRAKGLWEVPHPWLNLFVPKSRIQDFDKGVFKGILGNKTSGPILIYPMNKNKWDQRSSAVTPEEEVFYLVAFLRSALDTETLEYLSDQNRQILRFCHDAEIKGGIRRRVFCFLLNGDGGGGGGGAVEVLLSGDGLGREVEPQQGSGGAHMWGKRTMSQAVRNAHDMSQLSARDPDRPSDLVSLSRRSTTHPAHHLFVPFSLFLVLPFQIPCTYKILLRYVRVQLKLYGT* 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0245 599 Pfam FAD binding domain 66 210 IPR006094 GO:0050660
Aev08g0245 599 SUPERFAMILY FAD-linked oxidases, C-terminal domain 242 469 IPR016164 GO:0003824|GO:0050660
Aev08g0245 599 ProSiteProfiles PCMH-type FAD-binding domain profile. 61 241 IPR016166 GO:0071949
Aev08g0245 599 PANTHER GULONOLACTONE OXIDASE 11 472 - -
Aev08g0245 599 ProSitePatterns Oxygen oxidoreductases covalent FAD-binding site. 65 99 IPR006093 GO:0016491
Aev08g0245 599 MobiDBLite consensus disorder prediction 532 552 - -
Aev08g0245 599 Gene3D - 53 117 IPR016167 -
Aev08g0245 599 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 242 472 IPR015345 GO:0009690|GO:0019139|GO:0050660
Aev08g0245 599 SUPERFAMILY FAD-binding/transporter-associated domain-like 39 240 IPR036318 GO:0050660
Aev08g0245 599 Gene3D - 118 243 IPR016169 -
Aev08g0245 599 Gene3D - 245 472 IPR016170 -
Aev08g0245 599 PANTHER CYTOKININ OXIDASE 5-RELATED 11 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0245 Aev-Chr8 1383942 1389854 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0245 K00279 - gmx:100790584 763.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0245 08 1383942 1389854 Aev08g0245 08 1383942 1389854 ECH