Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0234 ATGGATGAGGAGAACGGTTACGGTGGCAGCAGCGGCAGCAGCAGCAGCTCAAACGTGGAGACTTCGAAAGCAGAGAGATCGGTGTGGCTTATGAAGTGCCCTCTTGTTGTGGCCAAGTCATGGCAGAACCATCCTACCTCCCACCCTCACCCCCTTGCTAAGGTTGTCCTCTCCCTTGATCCTCTTCACGCCGATGATCCCTCTTCTCTTCAGTTTACGATGGAGATGGCTGGCACTGATGCTGTTAATATGCCAAAAACTTATTCCTTGAATATGTTCAAAGACTTCGTACCTATGTGTGTATTCTCAGAGACAAACCAAGGTGGAAAGGTTGCAATGGAAGGGAAAGTAGAACATAAGTTTGATATGAAGCCCCATGGTGAAAACATTGAAGAGTATGGAAAATTGTGTCGAGAGAGGACCAACAAATCCATGATTAAAAATAGACAGATACAGGTTATTGATAATGACCGAGGAGTTCTGATGAGGCCAATGCCTGGAATGGTTGGTCTAGTGTCAACCAATTCAAAGGATAAGAAGAAGACGCAGCCAGTTAAACAATCTGATACAAAGAGAACAAGAATAGACAGAGGAGAACTGGAGGCTATAATGTTCAAGTTATTTGAAAGACAGCCTAATTGGGCCTTGAAGCAGCTTGTCCAAGAGACAGATCAACCTGCTCAATTCTTGAAGGAGATCCTGAATGAACTGTGTGTATACAATAAAAGAGGTGCCAATCAAGGAACTTACGAGCTGAAGCCTGAATACAAGAAATCTGTGGAAGATACAAGTGCCGAATAA 801 0.4407 MDEENGYGGSSGSSSSSNVETSKAERSVWLMKCPLVVAKSWQNHPTSHPHPLAKVVLSLDPLHADDPSSLQFTMEMAGTDAVNMPKTYSLNMFKDFVPMCVFSETNQGGKVAMEGKVEHKFDMKPHGENIEEYGKLCRERTNKSMIKNRQIQVIDNDRGVLMRPMPGMVGLVSTNSKDKKKTQPVKQSDTKRTRIDRGELEAIMFKLFERQPNWALKQLVQETDQPAQFLKEILNELCVYNKRGANQGTYELKPEYKKSVEDTSAE* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0234 266 MobiDBLite consensus disorder prediction 1 20 - -
Aev08g0234 266 SUPERFAMILY "Winged helix" DNA-binding domain 192 258 IPR036390 -
Aev08g0234 266 Pfam TFIIF, beta subunit N-terminus 25 148 IPR040504 -
Aev08g0234 266 Gene3D - 192 259 IPR036388 -
Aev08g0234 266 SUPERFAMILY Rap30/74 interaction domains 16 126 IPR011039 GO:0006367
Aev08g0234 266 CDD TFIIF_beta 18 125 - -
Aev08g0234 266 Pfam TFIIF, beta subunit HTH domain 193 257 IPR040450 -
Aev08g0234 266 PANTHER GENERAL TRANSCRIPTION FACTOR IIF SUBUNIT 2 16 265 IPR003196 GO:0005674|GO:0006366|GO:0006367
Aev08g0234 266 MobiDBLite consensus disorder prediction 171 192 - -
Aev08g0234 266 PANTHER OS01G0772200 PROTEIN 16 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0234 Aev-Chr8 1327820 1329970 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0234 K03139 - gmx:100788473 475.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0234 08 1327820 1329970 Aev08g0234 08 1327820 1329970 ECH