Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0233 ATGGCTCGCCACTCACTCTGGCTCCTCCTCCTCCTCGTCTCCGCCGCCGTAGCAGCCGCCGTAGTCTCCGAGGAGATCGACGATGGTGACGATTTTCTGATCCGTCAAGTGGTGGACGACGGCGAGGATCACTTGCTGAACGCGGAGCACCACTTCACAGCCTTCAAGACCAAGTTCGGCAAGTCCTACGCTACAGAGGAGGAGCACGACTACCGCTTTGGCATCTTCAAGAACAATTTGCTCCGAGCCAAGTCGCACCAGAAGCTTGACCCCTCCGCCGTACACGGCGTCACAAAGTTCTCCGATCTCACTCCGTCGGAGTTCCGAAGCCAGTTCCTGGGCCTAAGGCCTCTCCGCCTTCCCGCCGACGCTCACAACGCTCCGATCCTTCCAACCGACGATCTCCCAAAGGACTTTGACTGGCGCGAACATGGAGCCGTCACTGATATTAATTATGGTGGGATTGATGATGGTCAGGGCTCGTGTGGTTCGTGTTGGTCGTTTAGCACCACAGGAGCGTTGGAAGGAGCTCATTTTCTGGCAACTGGCGAGCTAGTGAGCCTTAGTGAGCAACAGCTTGTGGATTGTGATCACGAGTGTGATCCAGAAGAAGCTGGAGCATGTGACTCAGGCTGTAATGGTGGGTTGATGACCACTGCATTCGAGTACACACTCAAGGCCGGTGGACTAGTGCGAGAAGCAGACTATCCTTACACTGGAAGAGACCGTGGTCCCTGCAAACTTGACCAAAGCAAAATTGTTGCTTCCGTGTCTAACTACAGTGTGGTTTCCCTTGATGAAGACCAAATCGCTGCAAACCTGGTGAAGCATGGTCCTCTTGCAGTTGGTATCAATGCTGTTTATATGCAGACATACATAGGAGGCGTCTCATGCCCATACATCTGTGGCAAGCATTTGGATCATGGAGTTCTTCTGGTTGGGTATGGTGCTGGTGCTTACGCTCCTATTCGGCTGAAGGAAAAGCCTTACTGGATCATAAAGAACTCCTGGGGGGAGAACTGGGGAGAGGGCGGGTATTACAAGATCTGCAGAGGTCACAATGTATGTGGGGTGGATTCCATGGTCTCAACGGTAACTGCTATTCGAACATCTAGCCTTTAA 1122 0.5294 MARHSLWLLLLLVSAAVAAAVVSEEIDDGDDFLIRQVVDDGEDHLLNAEHHFTAFKTKFGKSYATEEEHDYRFGIFKNNLLRAKSHQKLDPSAVHGVTKFSDLTPSEFRSQFLGLRPLRLPADAHNAPILPTDDLPKDFDWREHGAVTDINYGGIDDGQGSCGSCWSFSTTGALEGAHFLATGELVSLSEQQLVDCDHECDPEEAGACDSGCNGGLMTTAFEYTLKAGGLVREADYPYTGRDRGPCKLDQSKIVASVSNYSVVSLDEDQIAANLVKHGPLAVGINAVYMQTYIGGVSCPYICGKHLDHGVLLVGYGAGAYAPIRLKEKPYWIIKNSWGENWGEGGYYKICRGHNVCGVDSMVSTVTAIRTSSL* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0233 373 PANTHER CYSTEINE PROTEASE RD19C-RELATED 27 367 - -
Aev08g0233 373 SUPERFAMILY Cysteine proteinases 49 365 IPR038765 -
Aev08g0233 373 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 330 349 IPR025661 -
Aev08g0233 373 Gene3D Cysteine proteinases 32 366 - -
Aev08g0233 373 PRINTS Papain cysteine protease (C1) family signature 330 336 IPR000668 GO:0006508|GO:0008234
Aev08g0233 373 PRINTS Papain cysteine protease (C1) family signature 159 174 IPR000668 GO:0006508|GO:0008234
Aev08g0233 373 PRINTS Papain cysteine protease (C1) family signature 308 318 IPR000668 GO:0006508|GO:0008234
Aev08g0233 373 SMART Inhibitor_I29_2 52 108 IPR013201 -
Aev08g0233 373 SMART pept_c1 135 366 IPR000668 GO:0006508|GO:0008234
Aev08g0233 373 CDD Peptidase_C1A 136 365 IPR039417 -
Aev08g0233 373 Pfam Cathepsin propeptide inhibitor domain (I29) 52 108 IPR013201 -
Aev08g0233 373 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 159 170 IPR000169 -
Aev08g0233 373 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 27 367 - -
Aev08g0233 373 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 306 316 IPR025660 -
Aev08g0233 373 Pfam Papain family cysteine protease 135 364 IPR000668 GO:0006508|GO:0008234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0233 Aev-Chr8 1325307 1326840 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0233 K01373 - gmx:100778716 622.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0233 08 1325307 1326840 Aev08g0233 08 1325307 1326840 ECH