LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev08g0228	ATGAATTTACTGACTAAAACCCTTGTGCCGAGCCAAAGTCGCATTGGCTTTGGGGGTTTTGGTTTAAGAGCTGATACTCACAAAAACACACACACACACTCACGATTCCGAAGAAGACAGAGGAGGCGCAACGCTCAAACTCACAGAGAGAAGACTGACAGTGTTAGTGGTGACGCTGCAGCCATGGGAGCTCTTGCCACATTCGCCCCCTGGATTCCTCAGGACGATCTTTTGCTCAAAAACGCCGTTGAGGCTGGTGCTTCCTTGGAGTCACTTGCAAAAGGTGCAGTGCAGTTTTCTCGGAGATATAGTTTTAGGGAAATACAAGATCGTTGGTATTCTCTCCTCTATGATCCTGTCATTTCTGCAGAAGCCTCTGCAGGCATGGCAAACTTCGAACTTTCTGCTGCTCCTCTCCCGTCAAGGTTTGTCAAATTTGGACAATCAAAAGAACGGAAAAATACTTCCGCGAAGAGAAAATCTGAAAGTGTTCGAAATTCTTATTACGCTATGCGGAAAAGAATCTGCAATGATGCGTTTGCTGCTATGGACTTAAGTTTTCTAGTTGATCCACAAAATGGAAACTATGTAGCGAATGGAAGTGAAACTTTACCTGAAAACTGTATGCCTGAAGGTGAAACCTCAAATCATTTTGGTTTCCAGGGATCAGATATTGATCCTGCACACTATGCTTATCCTGAAAATATGATGGATGGTAGTGCTGCTACTAATGGAGTTACTGCCCCCACGTATTACAATGGAGCTGAGGAGCCAACTGAAGAGAATTTCCACACTGAGCAAAACAATATACTTGAAGAAGAACATCAAATTCTAGGAGATAATGTTTCTTTGAATGGAGCTTTAGAGGAAGTGGGTCTTCCAAACGAATTTGCCATAGATAGCTTCCTTGGAGACCATGATTTAGAGAAAATGCCTGTTTCTACATTTGATCATATCAACAGTGACCCTGGAAATTTGTTTTCCGAGTTTAAGGGAGATCGTGTATTGGTTTCACCTAAGTTGGAGTGTGGATCATCTTTGAACACCGTCCACTTATCTCAGCTTCCTGAAATGCCTATCTGGAAAACAGGGGGCAGCATCCAAGAACCTGATTTGCCATGTGATGATTCTATTGCTTGCGGGGAGGCTTATCTGGCAGAGTTGTCCAATTCTCTCTTGAACTTCACCAATGAGGAAGAACTCTTTCTAATGGATGTTGATGGAAAGGATGGATTTGATAAGTCTTATTATGATGGTCTGAGTTCACTTTTGCTAAGTTCTCCTAGTGATGATAATCCAGATCAGATGCCTAAAACGGCTGAAACAGAGTTAAACGTGACCTCACAAGAACATGTTTCAGATCTGTCTGTTTCATGTCATGCAACTGAAGATGACAACAAGGGATCACACACTACCAATGCACAAACAGTTCCCAAATTAGAGTTGCAAGTACCATCTTCTGCTTCTGTTAAAGACCCTCAATTTCCCGAAAGGGTTAATGGAGTTATTTTCTGTACATTAAACACTGAAGACCCAGAAGTTCCATCCAATGATGATGTTTTCTTACCCTTTGACGTACCTCCTTCAACATTTCCTTTTTCATCTAAATGGACTTATACAGAACCCAATAAGCCAACTTCACCATCTGTTCAGGATTATGGATTTAGTAACCGTAAATCTAGTGAAAGAGGTAAAATGACAAAGGTGGATCAAAAGACACATGGAGAATCTCGTGGATCTTCTCAGATGATGGGATCTTCTCCCTTTCCAGGAACTGTTGGTAGTTCAAAGGTAAAATGTGAGTTTCCCAATAGTCATACATCACAAACAGTGTCCAGGAAAGCAGTGACTGTTTCTGGTGGCGTAGGTGGAAATAAGTCAGCAAACACAACCAATGCTCTCATGCATTCAAATCCAAAGGAAGATCCGACCAATGTTGTCTTGGCAAAGTATCGTAGCAATCGTGTCACCAATTCTTTCACTGAGAAACCAGTCCTTGGTTCTAATAATGTTAGAAACCATTCTCATCCTAATGGCTTAATCATGAAACAAGAACGAGATGTAGCCTTTCCAATTCAAGATCATCATTTGCAACATGCTGAAGTGGGATCCTCAGATGTTCCTGAGTTTGAGCTAGTGGCAAATCCTCCAACTTTAGATGAGGAAGAGCAATATATAGAGAGTGACGATGATGTCCCTTATTACTCGGATGTAGAGGCAATGATACTTGATATGGACTTGGATCCTGATGACCAGGATTTGCTCTATAATGAGGAAGTGTCAAGATATCAACATGAAGAAACTAAGCGGACTATCATAAGGCTGGAACAGGCTGCTCATTCTTATATGCAGAGAGCTATTGCTTCACATGGAGCATTTGCCATTCTATACGGTCGCCACTCAAAGCATTATATTAAGAAACCTGAGGTTTTACTCGGACGGGCGACAGAAGGTGTTCCAGTTGACATTGACTTGGGCAAAGGAGGGCATGCTAATAAAATATCTCGGCGTCAGGCGATTATAAGGATGGATAAAGATGGATCTTTCTACATTAAAAACTTCGGCAAGAGTTCAATCTTGGTAAACAACAAAGAAGTGTATTCTGGTCAGTCTCATAGACTACATTCCAATTGTCTGATCGAGTTGAGGGGCATGCCATTCATATTTGAGACAAATCAAAGTTGCGTGAAGCAGTATCTGGATCACAATACAGACAATTCGCAGGCCTTGTAG	2733	0.4175	MNLLTKTLVPSQSRIGFGGFGLRADTHKNTHTHSRFRRRQRRRNAQTHREKTDSVSGDAAAMGALATFAPWIPQDDLLLKNAVEAGASLESLAKGAVQFSRRYSFREIQDRWYSLLYDPVISAEASAGMANFELSAAPLPSRFVKFGQSKERKNTSAKRKSESVRNSYYAMRKRICNDAFAAMDLSFLVDPQNGNYVANGSETLPENCMPEGETSNHFGFQGSDIDPAHYAYPENMMDGSAATNGVTAPTYYNGAEEPTEENFHTEQNNILEEEHQILGDNVSLNGALEEVGLPNEFAIDSFLGDHDLEKMPVSTFDHINSDPGNLFSEFKGDRVLVSPKLECGSSLNTVHLSQLPEMPIWKTGGSIQEPDLPCDDSIACGEAYLAELSNSLLNFTNEEELFLMDVDGKDGFDKSYYDGLSSLLLSSPSDDNPDQMPKTAETELNVTSQEHVSDLSVSCHATEDDNKGSHTTNAQTVPKLELQVPSSASVKDPQFPERVNGVIFCTLNTEDPEVPSNDDVFLPFDVPPSTFPFSSKWTYTEPNKPTSPSVQDYGFSNRKSSERGKMTKVDQKTHGESRGSSQMMGSSPFPGTVGSSKVKCEFPNSHTSQTVSRKAVTVSGGVGGNKSANTTNALMHSNPKEDPTNVVLAKYRSNRVTNSFTEKPVLGSNNVRNHSHPNGLIMKQERDVAFPIQDHHLQHAEVGSSDVPEFELVANPPTLDEEEQYIESDDDVPYYSDVEAMILDMDLDPDDQDLLYNEEVSRYQHEETKRTIIRLEQAAHSYMQRAIASHGAFAILYGRHSKHYIKKPEVLLGRATEGVPVDIDLGKGGHANKISRRQAIIRMDKDGSFYIKNFGKSSILVNNKEVYSGQSHRLHSNCLIELRGMPFIFETNQSCVKQYLDHNTDNSQAL*	911

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aev08g0228	910	MobiDBLite	consensus disorder prediction	30	45	-	-
	Aev08g0228	910	MobiDBLite	consensus disorder prediction	611	639	-	-
	Aev08g0228	910	MobiDBLite	consensus disorder prediction	576	595	-	-
	Aev08g0228	910	SUPERFAMILY	SMAD/FHA domain	788	892	IPR008984	GO:0005515
	Aev08g0228	910	SMART	FHA_2	809	866	IPR000253	GO:0005515
	Aev08g0228	910	MobiDBLite	consensus disorder prediction	541	557	-	-
	Aev08g0228	910	MobiDBLite	consensus disorder prediction	29	56	-	-
	Aev08g0228	910	MobiDBLite	consensus disorder prediction	558	575	-	-
	Aev08g0228	910	MobiDBLite	consensus disorder prediction	611	641	-	-
	Aev08g0228	910	Pfam	FHA domain	811	882	IPR000253	GO:0005515
	Aev08g0228	910	CDD	FHA	806	890	IPR000253	GO:0005515
	Aev08g0228	910	Gene3D	-	754	905	-	-
	Aev08g0228	910	PANTHER	MICROSPHERULE PROTEIN 1	62	908	IPR037912	GO:0002151\|GO:0031011\|GO:0071339
	Aev08g0228	910	ProSiteProfiles	Forkhead-associated (FHA) domain profile.	810	866	IPR000253	GO:0005515
	Aev08g0228	910	PANTHER	FHA DOMAIN PROTEIN	62	908	-	-
	Aev08g0228	910	MobiDBLite	consensus disorder prediction	541	595	-	-
	Aev08g0228	910	Pfam	N-terminal region of micro-spherule protein	71	135	IPR025999	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev08g0228	Aev-Chr8	1287198	1292104	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev08g0228	-		-	aprc:113865691	1100.5

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aev08g0228	08	1287198	1292104	Aev08g0228	08	1287198	1292104	ECH