Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0145 ATGTTCGCTGCGATGTATTCGTTGACTGCGAAATCTTGCTTCATTCCTCAACTACTTGTTTCTTCTTCTTCTTCGTCCAATTATGCTTCAACCTCTCTTATTGGGTTCTTTCCGATTCGTTCCCCTTCATCAAAAATTAGCTTTCCCAGAATCTCGACGCGTAACCGAAAACTTGCTTTGAGAATTGAAGCTTATGATTCGTCCAACAATGACACTAATTCCAGTTCCAACTCTCCCGGCGATTCCAAGGCTCCCAATGGCACTCTCTCTAAGAGCAGGAGAGAAATTTTACTGGAGTATGTTAAGAACGTACAACCAGAATTTATGGAATTGTTTGTGAAAAGAGCACCTCAACAGGTTGTGGATGCAATGCGAGAAACAGTGACGAATATGATTGGATCACTACCCCCGCAATTTTTCTCTGTAACAATTACCACTGTAGCTGAAAATCTTGCACAGCTCATGTACAGTGTCATGATGACTGGATACATGTTCAGGAATGCACAATATCGTTTGGAGTTGCAACAAAGTTTGGAACAGGTTGCTCTTCCAGAGGTGCAAGATAAGAAGGATATGCCAGATTATGCACCTGGTACACAGAAGAATGTTTCGGGTGAAGTCATTCGATGGAACAATGTTTCTGGACCTGAGAGAATAGATGCTAAAAAGTACATTGAATTACTTGAAGCAGAGATAGAGGAGCTGAATAGTCAAGTTGGGAGACAATCTAGCAATGCACAAAATGAACTCTTGGAATATCTAAAATCTCTTGAGCCTCGTAATTTAAAGGATTTGACTAGTAGTGCTGGGGAGGATGTTGTGTTTGCAATGAATACCTTTATAAAGCGCCTACTGGCTGTTTCAGATCCTAGCCAGATGAAGACCAACGTGACCGAGACTAGTGCACCTGAACTTGCCAAGCTGCTGTATTGGTTGATGGTGGTTGGGTACAGCATTCGCAACATTGAAGTTCGTTATGACATGGAAAGAGTACTTGGCACTCCTCCAAAGCTTGCTGAATTGCCGCCAGCCAGAAATAGAAATGCTTTGATTGGATTTTGCACTTTTTTGGTTGATTGGCTAATGGAGCAGTCCATTCATGAGCTAAAGGAGAAGGAAGGAGATAACATGTTCGTATTGCCACCACGCCTCACCACTCCCTTCCCTTCTTCAACCCGCTCCAACTACTCCTTCCCTATCCCAACCACCCCCACCCTCCGCCACCACCCACCGCCATCCTCCGCCGCCAACTCCCAAACCCTGTCCACCTCCACCTACGCCGCCTTCTCCCCACTCATCATCGACGACGGCCCCGACGACATCCTCCCCCTCCAGAGCCGCCGCTATGACTTCACCCCTCTCCTCGAATTCCTCTCTTCTTCAACCACCGATCCCAACTCACCTCCTTCCCCTTCTTCCCTCGACCCCACCGAGTTCCAACTCGCCGAGTCATACCGAGCCGTACCCGCCCCACTCTGGCACGCCCTCCTGAAATCCTTGTGCTCCTCATCTTCCTCCATCGAGCTCGCATACGCCGTCGTTTCGTGGCTCCAGAAACACAACCTCTGCTTCTCCTATGAGCTCCTCTACTCGATCCTCATCAACGCGCTCGGTCGCAATGAGAAGCTCTACGAGGCCTTCTTGCTCTCACAAAAACAGGTCCTCACCCCCTTAACCTACAACGCGCTCATCGGCGCGTGTGCCCGCAACGGCGACCTCGAGAAAGCCCTCAACTTGATGAACCGAATGCGTCGCGACGGTTACCAGCCCGATTTCGTGAACTACAGTTCCATCATTCAGTCCCTCACGCGCTCCAACAGAATCGATTCCCCGATTCTGCAGAAGCTCTATCGGGAGATTCAGAGTGATAAGATTGAGCTTGATGCGCACCTTTTGAATGATATCATTTTAGGGTTTTCGAAAGCCGGTGATGCTACTAGGGCTTTGCAGTTTCTGGGTATGGCTCAGGGGAATGGGTTGAGTCCAAAGTCTGCGACTTTTGTTGCTGTTATCTTGGCTCTGGGGAATTCGGGTAGGACTGCGGAAGCTGAAGCGCTTTTTGAGGAGATTAAGGATAGTGGGTTGGAACCTAGGACTAAGGCTTATAATGCTCTGCTTAAAGGGTATGTGAAAACAGGGTCTTTGAAGGATGCTGAGTTCATTGTTTCTGAGATGGAGAAGAGTGGTGTTTTGCCTGATGAACAGACTTATAGTCTCTTGGTTGATGCGTATGCGCATGCTGGCAGGTGGGAGAGTGCTAGGATTGTGTTGAAGGAGATGGAGGCGAGCAATTTGCAGCCTAATTCCTTTATTTATAGTAGGATCTTGGCGGGTTATCGCGACAAGGGGGAGTGGCAGAAATCTTTTCAGGTGCTGAAGGAGATGAAGAGTAATGGGGTTCAACCTGATAGACATTTCTACAATGTGATGATTGACACTTTTGGGAAGTATAACTGTCTCGATCACGCCACGGCCACTTTTGACCGAATGATATCGGAAGGGATTAAGCCTGATACTGTTACATGGAATACACTGATTGATTGTCACTGCAAGTCGGGGCGCCACGATGTGGCGGAGGATTTGTTCCAAGAAATGCAGTGGAAAGGGTACTCTCCTTGTGTCATGACATATAACATTATGATCAATTCAATGGGGGAACAGCAGAGATGGAATGAAGTGAGTAACTTGTTGACTAGAATGCAGAGCCAAGGAGTGCTGCCCAATGCAGTTACATACACTACTCTGGTTGATATCTATGGAAAGTCTGGAAGGTTCGGTGACGCCATGGAGTGCTTGGAGGTCTTGAAATCTACCGGATTCAAGCCAACTTCAACTATGTACAATGCCTTAATCAATGCCTATGCACAAAGGGGTTTGTCTGAACAAGCAGTGAATGCCTTCAGGATGATGACAACTGAGGGTTTGACGCCCAGTCTTCTAGCTCTCAATTCACTAGTTAATGCATTCGGAGAAGATAGAAGAGATACTGAAGCCTTTGCTGTACTTCAGTACATGAAAGAAAATGGCTTGGATCCTGATGTCGTTACTTACACTACACTGATGAAAGCTTTGATTCGTGTTGACAAGTTCCACAAGGTTCCAGCTGTGTATGAAGAGATGATCATGTCAGGGTGCACTCCAGATAGAAAAGCTAGAGCAATGCTGCGATCTGCTCTTAGATACATGAAGCAGACATTGAGATCATAG 3207 0.4699 MFAAMYSLTAKSCFIPQLLVSSSSSSNYASTSLIGFFPIRSPSSKISFPRISTRNRKLALRIEAYDSSNNDTNSSSNSPGDSKAPNGTLSKSRREILLEYVKNVQPEFMELFVKRAPQQVVDAMRETVTNMIGSLPPQFFSVTITTVAENLAQLMYSVMMTGYMFRNAQYRLELQQSLEQVALPEVQDKKDMPDYAPGTQKNVSGEVIRWNNVSGPERIDAKKYIELLEAEIEELNSQVGRQSSNAQNELLEYLKSLEPRNLKDLTSSAGEDVVFAMNTFIKRLLAVSDPSQMKTNVTETSAPELAKLLYWLMVVGYSIRNIEVRYDMERVLGTPPKLAELPPARNRNALIGFCTFLVDWLMEQSIHELKEKEGDNMFVLPPRLTTPFPSSTRSNYSFPIPTTPTLRHHPPPSSAANSQTLSTSTYAAFSPLIIDDGPDDILPLQSRRYDFTPLLEFLSSSTTDPNSPPSPSSLDPTEFQLAESYRAVPAPLWHALLKSLCSSSSSIELAYAVVSWLQKHNLCFSYELLYSILINALGRNEKLYEAFLLSQKQVLTPLTYNALIGACARNGDLEKALNLMNRMRRDGYQPDFVNYSSIIQSLTRSNRIDSPILQKLYREIQSDKIELDAHLLNDIILGFSKAGDATRALQFLGMAQGNGLSPKSATFVAVILALGNSGRTAEAEALFEEIKDSGLEPRTKAYNALLKGYVKTGSLKDAEFIVSEMEKSGVLPDEQTYSLLVDAYAHAGRWESARIVLKEMEASNLQPNSFIYSRILAGYRDKGEWQKSFQVLKEMKSNGVQPDRHFYNVMIDTFGKYNCLDHATATFDRMISEGIKPDTVTWNTLIDCHCKSGRHDVAEDLFQEMQWKGYSPCVMTYNIMINSMGEQQRWNEVSNLLTRMQSQGVLPNAVTYTTLVDIYGKSGRFGDAMECLEVLKSTGFKPTSTMYNALINAYAQRGLSEQAVNAFRMMTTEGLTPSLLALNSLVNAFGEDRRDTEAFAVLQYMKENGLDPDVVTYTTLMKALIRVDKFHKVPAVYEEMIMSGCTPDRKARAMLRSALRYMKQTLRS* 1069
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0145 1068 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 838 872 IPR002885 -
Aev08g0145 1068 Gene3D Tetratricopeptide repeat domain 617 712 IPR011990 GO:0005515
Aev08g0145 1068 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 1013 1047 IPR002885 -
Aev08g0145 1068 Gene3D Tetratricopeptide repeat domain 901 969 IPR011990 GO:0005515
Aev08g0145 1068 Gene3D Tetratricopeptide repeat domain 469 616 IPR011990 GO:0005515
Aev08g0145 1068 Gene3D Tetratricopeptide repeat domain 830 900 IPR011990 GO:0005515
Aev08g0145 1068 Gene3D Tetratricopeptide repeat domain 970 1045 IPR011990 GO:0005515
Aev08g0145 1068 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 978 1012 IPR002885 -
Aev08g0145 1068 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN CRP1 HOMOLOG, CHLOROPLASTIC 471 1067 - -
Aev08g0145 1068 Gene3D Tetratricopeptide repeat domain 713 829 IPR011990 GO:0005515
Aev08g0145 1068 Coils Coil 218 245 - -
Aev08g0145 1068 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 698 732 IPR002885 -
Aev08g0145 1068 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 908 942 IPR002885 -
Aev08g0145 1068 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 556 590 IPR002885 -
Aev08g0145 1068 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 733 767 IPR002885 -
Aev08g0145 1068 TIGRFAM PPR: pentatricopeptide repeat domain 910 943 IPR002885 -
Aev08g0145 1068 TIGRFAM PPR: pentatricopeptide repeat domain 876 909 IPR002885 -
Aev08g0145 1068 TIGRFAM PPR: pentatricopeptide repeat domain 983 1014 IPR002885 -
Aev08g0145 1068 TIGRFAM PPR: pentatricopeptide repeat domain 701 734 IPR002885 -
Aev08g0145 1068 TIGRFAM PPR: pentatricopeptide repeat domain 559 591 IPR002885 -
Aev08g0145 1068 TIGRFAM PPR: pentatricopeptide repeat domain 771 803 IPR002885 -
Aev08g0145 1068 TIGRFAM PPR: pentatricopeptide repeat domain 736 768 IPR002885 -
Aev08g0145 1068 TIGRFAM PPR: pentatricopeptide repeat domain 946 978 IPR002885 -
Aev08g0145 1068 TIGRFAM PPR: pentatricopeptide repeat domain 840 872 IPR002885 -
Aev08g0145 1068 TIGRFAM PPR: pentatricopeptide repeat domain 666 697 IPR002885 -
Aev08g0145 1068 TIGRFAM PPR: pentatricopeptide repeat domain 807 839 IPR002885 -
Aev08g0145 1068 TIGRFAM PPR: pentatricopeptide repeat domain 1015 1048 IPR002885 -
Aev08g0145 1068 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 663 697 IPR002885 -
Aev08g0145 1068 Pfam PPR repeat family 699 745 IPR002885 -
Aev08g0145 1068 Pfam PPR repeat family 837 883 IPR002885 -
Aev08g0145 1068 Pfam PPR repeat family 980 1025 IPR002885 -
Aev08g0145 1068 Pfam PPR repeat family 559 602 IPR002885 -
Aev08g0145 1068 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 943 977 IPR002885 -
Aev08g0145 1068 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATED 471 1067 - -
Aev08g0145 1068 Pfam PPR repeat 666 695 IPR002885 -
Aev08g0145 1068 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 803 837 IPR002885 -
Aev08g0145 1068 MobiDBLite consensus disorder prediction 68 88 - -
Aev08g0145 1068 Pfam Pentatricopeptide repeat domain 756 816 IPR002885 -
Aev08g0145 1068 Pfam Pentatricopeptide repeat domain 896 956 IPR002885 -
Aev08g0145 1068 Pfam Protein of unknown function (DUF760) 249 332 IPR008479 -
Aev08g0145 1068 Pfam Protein of unknown function (DUF760) 97 178 IPR008479 -
Aev08g0145 1068 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 768 802 IPR002885 -
Aev08g0145 1068 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 873 907 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0145 Aev-Chr8 826053 833737 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0145 529 924 Glycosyltransferase AT1G05670 28.678 1.34e-47 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0145 - - gmx:100778551 1099.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0145 08 826053 833737 Aev08g0145 08 826053 833737 ECH