Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0137 ATGGACCTTCGCTTAGGGCTTCTCACCTTCCTCTCTCTCTTACAGGTTTGTCTAATTTTATCGTTGGTAGAAGCAGATAGTTTGGCTTCAAGCCCTCTTTCGACACCCAATGCTGCAAAACCGGGGGAAAAGCATGCCGAGAATTATTGTGCAATGTATGACATTTGTGGAAAGCGCAGTGATGGTAAAGTAGTGAACTGTCCATATGGTTCCCCAGCTATGAAGCCAGATGATTTGCTTTCATCAAAGATCCAAAGTTTGTGTCCAACAATTACGGGGAATGTTTGTTGTACAGAGGCTCAGTTTGACACATTAAAGACGCAAGTCCAACAGGCAATTCCTTTTCTTGTAGGTTGTCCAGCATGCTTAAGAAACTTTTTGAATCTGTTCTGTGAGCTTACATGCTCTCCGAATCAAAGTTTATTTATCAACGTGACTTCAGTTGACAAGATTGGTGGTAATTTGACAGTCGGTGGGATTGACTATTATGTAACTGATGCTTTTGGTGAAGGGTTATATGAGTCCTGCAAGGATGTAAAATTTGGCACCATGAACTCTAGAGCTATGCAATTTATAGGTGCTGGTGCTAAAAATTTTAAAGAGTGGTTTGCTTTTATTGGTAGAAAAGCAGCCCCTGGTGGTCTTGGTTCACCATATGCGATTACGTTCCAGTCAAATACAATCGAGTCATCTGGCATGAAACCTATGAATGTTTCAACTTATTCGTGCGGTGATATTTCTCTTGGCTGTTCTTGTGGTGATTGTCCTTCATCTTCAGTATGCTCTAATTCAGCTTCAACTACCCCCCATAAGAAGGATTCCTGCTCTGTGAAAGTTGGGTCTTTAATGGTGAAGTGTGTGGATTTCATTTTAGCAGTGTTATACATCATACTGGTTTCTGTGTTCTTGGGTTGGGGTTTTCATCATCGGATAAAGGAAAGAAAGCTGTCATATAGAACAAAACTGGAGTCTAATGTCACCAGTGGTGTTGCGATGCACTCTCTTAATAGGGAAAAGGATGAGAACCTCCCTATGCGGCAGGTGATTGAAGATGCTTCACAAAATAGAAATGGAGTTAGGCTCTCAGCTGTGCAAGGATATATGTCAAATTTTTATAGGAAATACGGACCATATGTGGCTAGAAATCCAATTACGGTTTTGTCTTCATCTCTGGCTATAGTTCTTCTACTTTGTCTAGGTCTAATCCGATTCAAGGTTGAGACACGGCCTGAGAAGCTCTGGGTAGGACCTGGGAGTAAGGCAGCGCAAGAGAAACACTTTTTTGATAGCCATCTTGCTCCATTTTACAGAATTGAACAGCTCATACTTGCAACAGTTCCAGATTCTGTAAATGCTAAATCACCAAAAATTGTGTCAGAGGACAACATTAAATTTCTCTTTGAAATTCAAAAAAGGGTTGATGCAATTCGTGCTAATTATTCTGGCTTGATGGTATCTCTACAAGACATCTGTTTGAAGCCGCTAGATAAAGATTGTGCCACTCAAAGTGTCCTGCAGTACTTCAAAATGGATCCAAAAAATTTTGACGATTATGGGGGAGTTGATCATCTCAATTACTGTTTTGAGCATTATTCCTCAGCAGACAGATGTATGAGTGCATTTCAAGCTCCTCTTGATCCGAGCACTGTCTTAGGAGGTTTCTCTGGGAACAATTATTCAGGGGCAACTGCATTTATTGTAACTTATCCAGTAAATAATGCCATTGATGGAGAAAGTAATGAGACCGGAAAGGCAGTCGCTTGGGAGAAGACTTTTATTCAGTTGGTGAAGGATGAGCTATTACCGATGGTGCAATCAAGAAATTTGACACTTGCTTTTTCATCTGAAAGCTCCATCGAGGAAGAGTTAAAAAGAGAAAGTACTGCTGATGCTATTACTATATTGATTAGCTATCTTGTCATGTTTGCTTATATATCTCTTACTTTAGGGGATACACCGCACCGCTCTTCTTTCTATATTTCATCTAAGGTTTTGCTAGGTCTCTCTGGAGTACTGCTTGTTATGCTGTCTGTCCTTGCATCAGTTGGAGTTTTTAGTGCCCTTGGTGTAAAATCAACACTGATCATCATGGAAGTTATCCCATTTCTTGTTCTAGCAGTTGGGGTGGATAATATGTGTATTCTAGTTCATGCCGTGAAAAGGCAACAGCTAGAGTTGCCTTTAGAAGAACGAATAAGCAAAGCTCTTGCGGAAGTTGGACCATCAATAACCTTGGCTAGTTTATCAGAGGTTTTAGCATTTGCAGTTGGAAGCTTTATTTCCATGCCTGCGTGTCGTGTGTTCTCCATGTTTGCAGCATTGGCTGTTCTTCTGGACTTTCTCCTTCAAGTTACTGCTTTTGTTGCTCTGATAGTTCTTGATTCGCTGCGAGCAGAGGATAAGAGAGTTGATTGTTTTCCATGCATAAAAGTCCATTTGTCGCATGCAGACCCTGATAAAGGATTTGGACGAAGGAAGCCTGGTGTATTGGCTCGATATATGAAGGAGGTTCATGCTCCCATTCTGAGTATATGGGGAGTAAAAATTGTTGTGATTGCTATTTTCGCAGCATTTGCATTGGCTAGCATTGCACTAAGTACAAGAATTGAACCCGGTTTAGAGCAGCAGATCGTTCTTCCACGAGACTCATATCTTCAGGGGTACTTCAATAATATTTCAGAATATCTCAGAATTGGACCACCTGTGTATTTTGTTGTGAAGAACTATAACTACAGCTCAGAATCAACACAAACAAATCAGCTTTGCTCCATTAGCCACTGCAATTCAGACTCTCTTTTAAATGAGATTGCTAAGGCAGCCCTAGTACCAGACACAAGTTATATTGCCAAGCCAGCTGCCTCGTGGCTTGATGATTTTCTTGTGTGGGTATCTCCAGAAGCATTTGGGTGCTGTAGGAAGTTCAGAAATGGGAGTTACTGCCCTCCGGATGATCAGCCTCCTTGTTGCGCTCCTGGTGAAGGTTCTTGTGTTTCTGTTGGAGCATGCAACGATTGCACAACGTGTTTCCGTCACTCAGATCTCCATAACGATCGCCCATCAACTGCACAATTTAGGGACAAACTGCCATGGTTTCTTAGCGCTCTGCCATCTGCTGATTGTGCGAAAGGTGGTCATGGGGCTTATACCAGCAGTGTTGACTTGAAGGGCTATGGAAGTGGCATTATCCAAGCGTCATCATTCCGAACATATCATACCCCACTCAACAAGCAGATCGACTATGTTAACTCAATGAGGGCTGCCCGAGAGTTCAGTTCAAGAGTTTCTGATTCATTAAAGATTGAGATCTTCCCATATTCAGTGTTTTACATGTTTTTTGAGCAATACCTTCATATATGGAAGACTGCTTTGGTCAATCTTGCAATTGCTATTGGTGCAGTATTTATTGTGTGCTGGGTTATCACATGCAGTCTATGGAGCTCAGCAATCATTCTGTTGGTGTTGGTGATGATTGTTGTCGATCTCATGGGTGTGATGGCCATTCTGAATATCCAGTTAAATGCTGTTTCTGTGGTCAACCTTATTATGTCAGTGGGCATTGCTGTTGAGTTTTGTGTACATATGACTCATTCTTTTTCTGTAACTAGCGGAGACAGAGATCAACGAGTTAAGGAATCTCTAGGTACAATGGGAGCTTCAGTGTTCAGTGGTATCACACTAACAAAGCTCGTTGGAGTTATCGTTCTTTGCTTCTCAAGGACAGAAGTTTTCGTGGTTTATTACTTTCAGATGTACTTGTCGTTAGTACTTCTTGGTTTCTTGCACGGGCTTGTTTTCTTGCCGGTGGTATTAAGCATATGCGGTCCTCCTTCAAGGTGTATAAGCATTGACCAAGGGGAAGATCGTTCAACAATTTCTTCATAG 3882 0.4158 MDLRLGLLTFLSLLQVCLILSLVEADSLASSPLSTPNAAKPGEKHAENYCAMYDICGKRSDGKVVNCPYGSPAMKPDDLLSSKIQSLCPTITGNVCCTEAQFDTLKTQVQQAIPFLVGCPACLRNFLNLFCELTCSPNQSLFINVTSVDKIGGNLTVGGIDYYVTDAFGEGLYESCKDVKFGTMNSRAMQFIGAGAKNFKEWFAFIGRKAAPGGLGSPYAITFQSNTIESSGMKPMNVSTYSCGDISLGCSCGDCPSSSVCSNSASTTPHKKDSCSVKVGSLMVKCVDFILAVLYIILVSVFLGWGFHHRIKERKLSYRTKLESNVTSGVAMHSLNREKDENLPMRQVIEDASQNRNGVRLSAVQGYMSNFYRKYGPYVARNPITVLSSSLAIVLLLCLGLIRFKVETRPEKLWVGPGSKAAQEKHFFDSHLAPFYRIEQLILATVPDSVNAKSPKIVSEDNIKFLFEIQKRVDAIRANYSGLMVSLQDICLKPLDKDCATQSVLQYFKMDPKNFDDYGGVDHLNYCFEHYSSADRCMSAFQAPLDPSTVLGGFSGNNYSGATAFIVTYPVNNAIDGESNETGKAVAWEKTFIQLVKDELLPMVQSRNLTLAFSSESSIEEELKRESTADAITILISYLVMFAYISLTLGDTPHRSSFYISSKVLLGLSGVLLVMLSVLASVGVFSALGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQQLELPLEERISKALAEVGPSITLASLSEVLAFAVGSFISMPACRVFSMFAALAVLLDFLLQVTAFVALIVLDSLRAEDKRVDCFPCIKVHLSHADPDKGFGRRKPGVLARYMKEVHAPILSIWGVKIVVIAIFAAFALASIALSTRIEPGLEQQIVLPRDSYLQGYFNNISEYLRIGPPVYFVVKNYNYSSESTQTNQLCSISHCNSDSLLNEIAKAALVPDTSYIAKPAASWLDDFLVWVSPEAFGCCRKFRNGSYCPPDDQPPCCAPGEGSCVSVGACNDCTTCFRHSDLHNDRPSTAQFRDKLPWFLSALPSADCAKGGHGAYTSSVDLKGYGSGIIQASSFRTYHTPLNKQIDYVNSMRAAREFSSRVSDSLKIEIFPYSVFYMFFEQYLHIWKTALVNLAIAIGAVFIVCWVITCSLWSSAIILLVLVMIVVDLMGVMAILNIQLNAVSVVNLIMSVGIAVEFCVHMTHSFSVTSGDRDQRVKESLGTMGASVFSGITLTKLVGVIVLCFSRTEVFVVYYFQMYLSLVLLGFLHGLVFLPVVLSICGPPSRCISIDQGEDRSTISS* 1294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0137 1293 TIGRFAM 2A060601: Niemann-Pick C type protein family 50 1273 IPR004765 GO:0005319|GO:0016021
Aev08g0137 1293 Gene3D Multidrug efflux transporter AcrB transmembrane domain 592 802 - -
Aev08g0137 1293 SUPERFAMILY Multidrug efflux transporter AcrB transmembrane domain 608 793 - -
Aev08g0137 1293 ProSiteProfiles Sterol-sensing domain (SSD) profile. 630 793 IPR000731 -
Aev08g0137 1293 SUPERFAMILY Multidrug efflux transporter AcrB transmembrane domain 1083 1274 - -
Aev08g0137 1293 PANTHER NPC INTRACELLULAR CHOLESTEROL TRANSPORTER 1 6 1292 - -
Aev08g0137 1293 Gene3D Multidrug efflux transporter AcrB transmembrane domain 1081 1278 - -
Aev08g0137 1293 Pfam Patched family 1061 1273 IPR003392 GO:0016021
Aev08g0137 1293 Pfam Patched family 455 910 IPR003392 GO:0016021
Aev08g0137 1293 PANTHER PATCHED FAMILY PROTEIN 6 1292 - -
Aev08g0137 1293 Pfam Niemann-Pick C1 N terminus 48 277 IPR032190 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0137 Aev-Chr8 761736 774831 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0137 44 1293 Miscellaneous Gene Families AT1G42470 73.280 0.0 1850
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0137 K12385 - gmx:100784611 2170.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0137 08 761736 774831 Aev08g0137 08 761736 774831 ECH