Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0110 ATGGCCTTTTCCATCTCCAAAACACTCTTCCTGACCTGCACCTTATGCTTCTTTGCGACTCTGGCTATTGCGCGTGATTTCTCCATTGTGGGGTACTCCTCTGAGGACTTGAAGTCCATGGACAAGCTCATTGAGCTCTTTGAATCGTGGATGTCGAAACACGGAAAGATGTACGAGTCCATCGAGGAGAAGCTTCTCAGGTTCGAGGTTTTCAAGGATAACCTGAAGCACATTGATGAGAGGAACAAGGTTGTGAGAAACTACTGGCTCGGGCTGAATGAGTTTGCTGATTTGACTCAGCAGGAGTTCAAGAACAAGTACTTGGGCCTCAAGGTTGACTCCTCCAGAGCAAGAGAGGATGCAGAGTTCAGTTACAGAGATGTTGATTTGCCAAAGTCTGTGGATTGGAGAAAGAAAGGTGCTGTCACCCCTGTCAAGAACCAAGGCTCATGCGGTAGCTGCTGGGCATTTTCCACTGTTGCAGCGGTGGAGGGAATAAACCAGATTGTGACCGGAAATCTGACATCTCTGTCTGAGCAAGAGTTGATCGACTGTGACACAACTTACAACAGCGGCTGCAATGGGGGCCTCATGGACTACGCGTTCTCCTTCATTGTTGAAAACGGTGGACTCCACAAAGAGGAAGATTATCCTTACATTATGGAGGAAGGCACTTGCGACATGAGAAAGGAAGAGGCCGAGGTCGTCACCATTAGCGGGTACCATGACGTGCCACAGAACGACGAAGCGAGCCTATTGAAGGCACTTGCAAACCAACCCCTCAGTGTGGCCATAGAGGCTTCAGGCAGAGACTTCCAATTCTACAGTGGGGGTGTTTTTGATGGACACTGCGGGACAGAGCTAGATCACGGTGTGGCGGCTGTCGGATATGGAACATCCAAGGGGGGGGATTACATAATAGTGAAGAACTCATGGGGAGCAAAGTGGGGAGAGAAAGGGTACATAAGGATGAAGAGGAACATCGGAAAGCCAGAGGGGATCTGTGGACTCTACAAGATGGCTTCTTATCCCACAAAGAAGAAATGA 1047 0.4928 MAFSISKTLFLTCTLCFFATLAIARDFSIVGYSSEDLKSMDKLIELFESWMSKHGKMYESIEEKLLRFEVFKDNLKHIDERNKVVRNYWLGLNEFADLTQQEFKNKYLGLKVDSSRAREDAEFSYRDVDLPKSVDWRKKGAVTPVKNQGSCGSCWAFSTVAAVEGINQIVTGNLTSLSEQELIDCDTTYNSGCNGGLMDYAFSFIVENGGLHKEEDYPYIMEEGTCDMRKEEAEVVTISGYHDVPQNDEASLLKALANQPLSVAIEASGRDFQFYSGGVFDGHCGTELDHGVAAVGYGTSKGGDYIIVKNSWGAKWGEKGYIRMKRNIGKPEGICGLYKMASYPTKKK* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0110 348 Gene3D Cysteine proteinases 26 347 - -
Aev08g0110 348 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 24 346 - -
Aev08g0110 348 Pfam Cathepsin propeptide inhibitor domain (I29) 47 103 IPR013201 -
Aev08g0110 348 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 288 298 IPR025660 -
Aev08g0110 348 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 148 159 IPR000169 -
Aev08g0110 348 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 305 324 IPR025661 -
Aev08g0110 348 SMART Inhibitor_I29_2 47 103 IPR013201 -
Aev08g0110 348 SUPERFAMILY Cysteine proteinases 42 345 IPR038765 -
Aev08g0110 348 PANTHER CYSTEINE PROTEASE XCP1-LIKE 24 346 - -
Aev08g0110 348 Pfam Papain family cysteine protease 130 344 IPR000668 GO:0006508|GO:0008234
Aev08g0110 348 PRINTS Papain cysteine protease (C1) family signature 290 300 IPR000668 GO:0006508|GO:0008234
Aev08g0110 348 PRINTS Papain cysteine protease (C1) family signature 305 311 IPR000668 GO:0006508|GO:0008234
Aev08g0110 348 PRINTS Papain cysteine protease (C1) family signature 148 163 IPR000668 GO:0006508|GO:0008234
Aev08g0110 348 SMART pept_c1 130 345 IPR000668 GO:0006508|GO:0008234
Aev08g0110 348 CDD Peptidase_C1A 131 344 IPR039417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0110 Aev-Chr8 616315 617659 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0110 K16290 - gmx:100788466 646.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0110 08 616315 617659 Aev08g0110 08 616315 617659 ECH