Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0107 ATGGCGACTACGTCCCCCGCCAGCACAGCCCCAGCTCCATCTCCATCTCCGGCCACTGTCGCCGCCGCCGCACCCGCTGAACCTCCCTCTTCCTCTGCCGAAACTACCCCGCCCCCACCCAAGCAAACGCCACCTCCGCCGCCGCCGAAACCCGAAGCCCCATTGCTCGAGTCCAAAATCTCCGCAGACGCCAGCGTGGTCCTAGTGCCTAGCCACTCGAGATGGTTCTCCTTGGATTCCATTCACGAATGCGAGTTCCGCCACCTCCCCGAGTTCTTCGACTCCTCCTCTTCCTCCTCCAAAACCCCTAGGGTTTACAAGTACTACCGAAACACCATCGTCAAATACTTCCGATACAATCCCTCCCGTAAAATCACTTTCACTGACGTCCGCAAAACCCTCGTCGGAGACGTCGGTTCGATCCGCAGAGTCTTCGATTTCTTAGAAGCATGGGGATTAATCAATTACCATCCATCTTCGTCGCAGAATAAGCCCTTGAAATGGGACGACAAAGACTCCAAAAACGATGCTGGATCCAACACCAATGAACCTCCGCCTCTCATTCGAGAAACCACCAAGAGAATCTGCAGTGGCTGTAAAGCCGTTTGCACCATTGCCTGTTTCGCTTGCGATAAGTATGATTTGACTCTGTGTGCGAGGTGTTATGTTCGGGGGAACTATAGAGTTGGTGTGAGCTCTTCGGATTTTAAGAGAGTTGAGATTAGTGAAGAGACAAAGACTGATTGGAGTGAGAAGGAAACTTTGAATCTTCTGGAAGCCATCACGCATTATGGTGATGACTGGAAGAGGGTTGCTCAGCATGTTGGTGGGAGGGCTGAGAAGGACTGCGTTGCTCAGTTCATCAAGCTTCCTTTTGGGGACCAGTTCCTGCGTTGTCTGGGCTACGGTGTGGGCGATGACAGTGCGAATCAGTTGAAGAAGGACACCGTTGCTGAAGCTGCAGAGCCTGGTAAAAGAATGCGCCTCACGCCTCTTGCCGATGCAAGCAATCCTATCATGGCTCAGGCTGCTTTCCTGTCAGCTTTGGCGGGATCAGAGGTTGCACAGGCTGCTGCTCAAGCTGCAGTGACTACTCTCTCTGAGGTTTACAAACCAATTCGAATATATCATCGCTCATTTCCGAGGAACCCATCGTTGCAAGAAGCTGGTATTGCATCTAATGGTGGTAACACGTCGGATTCATCTCAAGTATCACGATTGCATGCGAATACACAGCTCGAGAAGGAAGAGTCAGATGTGGAGAAGGCGATTTCTGAGGTTATTGAAGTTCAGATGAAGAATATACAAGACAAGCTTGTCCGTTTTCAAGATTCGGACCTGCTGATTGAGAAAGAATGCCAGCAGTTGGAGCAAATGAGAAATATGCTTTTTCTTGATCAGCTCTCTCTTTTATTTCATAAACAAAAATCTGGAGAACGCACAGAAAGCAATAGTGTAAAGACAAATTGA 1470 0.4993 MATTSPASTAPAPSPSPATVAAAAPAEPPSSSAETTPPPPKQTPPPPPPKPEAPLLESKISADASVVLVPSHSRWFSLDSIHECEFRHLPEFFDSSSSSSKTPRVYKYYRNTIVKYFRYNPSRKITFTDVRKTLVGDVGSIRRVFDFLEAWGLINYHPSSSQNKPLKWDDKDSKNDAGSNTNEPPPLIRETTKRICSGCKAVCTIACFACDKYDLTLCARCYVRGNYRVGVSSSDFKRVEISEETKTDWSEKETLNLLEAITHYGDDWKRVAQHVGGRAEKDCVAQFIKLPFGDQFLRCLGYGVGDDSANQLKKDTVAEAAEPGKRMRLTPLADASNPIMAQAAFLSALAGSEVAQAAAQAAVTTLSEVYKPIRIYHRSFPRNPSLQEAGIASNGGNTSDSSQVSRLHANTQLEKEESDVEKAISEVIEVQMKNIQDKLVRFQDSDLLIEKECQQLEQMRNMLFLDQLSLLFHKQKSGERTESNSVKTN* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0107 489 MobiDBLite consensus disorder prediction 31 54 - -
Aev08g0107 489 Gene3D - 244 294 - -
Aev08g0107 489 ProSiteProfiles Myb-like domain profile. 241 291 IPR001005 -
Aev08g0107 489 PANTHER SWI/SNF COMPLEX SUBUNIT SWI3B 1 479 - -
Aev08g0107 489 PANTHER SWI/SNF COMPLEX-RELATED 1 479 - -
Aev08g0107 489 SUPERFAMILY Homeodomain-like 64 164 IPR009057 -
Aev08g0107 489 MobiDBLite consensus disorder prediction 162 187 - -
Aev08g0107 489 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 246 283 IPR017930 -
Aev08g0107 489 SMART sant 245 293 IPR001005 -
Aev08g0107 489 MobiDBLite consensus disorder prediction 1 55 - -
Aev08g0107 489 ProSiteProfiles SWIRM domain profile. 67 165 IPR007526 GO:0005515
Aev08g0107 489 Gene3D - 73 160 IPR036388 -
Aev08g0107 489 SUPERFAMILY Homeodomain-like 245 295 IPR009057 -
Aev08g0107 489 Coils Coil 413 433 - -
Aev08g0107 489 MobiDBLite consensus disorder prediction 386 418 - -
Aev08g0107 489 Pfam SWIRM domain 70 156 IPR007526 GO:0005515
Aev08g0107 489 MobiDBLite consensus disorder prediction 386 409 - -
Aev08g0107 489 Pfam SWIRM-associated region 1 409 477 IPR032451 -
Aev08g0107 489 CDD SANT 249 290 IPR001005 -
Aev08g0107 489 Pfam Myb-like DNA-binding domain 247 289 IPR001005 -
Aev08g0107 489 ProSiteProfiles SANT domain profile. 244 295 IPR017884 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0107 Aev-Chr8 606103 608095 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0107 196 287 EF-hand Containing Proteins AT3G07740 33.333 3.71e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0107 K11649 - gmx:100779777 647.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0107 08 606103 608095 Aev08g0107 08 606103 608095 ECH