Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0032 ATGGGTTTCTTCAGTACCATATTTGGGGTTTTTGGCTTCGGATTTGGGATTATCTTTGGCATTCTTGCTGGCTATTTTCTCTTCATTTATTCCCAACCATCCAATGTTGAGGATCCTGAGATCAAGCCATTGGTGGATCAAGACTCACCCACTTTGCAACGAATGATCCCTGAGATTCCACTTTGGATTAAAAATCCAGATTTTGATCGGATTGATTGGCTTAACAAGCTTCTTGAATATATGTGGCCTTATCTTGACAAGGCAATATGCAAGACTGCACAGGACATTGCAAAACCCATAATTGCGGAGCAGATCCCAAAATATAAGATTGATGATGTTGTGTTTGAAGTGCTCACACTGGGCAAGCTGCCCCCAACTTTTCAAGGAATGAAAGTGTATGCCACTGAGGAAAAGGAGTTAATTATGGAGCCTTCTTTAAAATGGGCTGGAAATCCTAACGTCACCATTGCAGTCAAGGCATTTGGGTTGAAACCAACCATTCAGGTGCTGGATTTGCAAGTTTTTCTCGCACCTCGTGTTACTCTGAAACCATTGGTCCCAAGCTTTCCATGCTTTGCCAACATCTTTGTGTCTCTCATGGAAAAGCCACATGTTGACTTTGGGCTAAAACTTGTAGGGGCTGATCTTATGTCTATTCCTGGCCTCTACAGGTTTGTTCAGGAGCTTATAAAAGATCAGGTTGCAAATATGTACCTATGGCCCAAGACACTGGATGTTCAAATTATGGATCCGGCAAAAGCCATGAAGAGGCCTGTCGGAATTTTAGTTGTAAAGGTTGTGAGAGCAATGAAGTTGAAGAAGAAAGATCTTCTTGGTGCATCTGACCCTTACGTGAAGCTAAAGCTTTTAGGAGATAATATGCCATCGAAAAAGACTACAGTGAAGCACAAGAACTTGAACCCTGAATGGAACGAAGAATTTAATTTGGTTGTTAAGGATCCTGAGTCCCAGTCAGTGGAGTTTCAAGTTTTTGATTGGGAGCAGGTTGGGAAGCATGACTTTATGGGAATGAATGCGATCGCTTTGAAAGATCTTACCCCTGAAGAGGCAAAAGTGTTCAATCTTGACCTCCTAAAAAACTTGGATGCAAATGATAGCCAAAATGACAAGTCCCGCGGGCAAATAGTTTTGGAATTGACTTATAAACCTTTCAAGGAGGAAGACATGGGCAGGGGTTTTGAGGAGACGTTGTCCATGGAAAAAGCTCCTGAAGGCACTCCTCCTGGTGGGGGTTTGCTTGTTGTCATAGTCCATGAGGCTCAAGACGTCGAAGGAAAGTACCACACTAATCCACAAGCGCGAATTATTTTCAGAGGGGAGGAGAAAAAGACTAAGCACGTGAAAAAGAGCAGAGATCCAAGATGGGAAGAGGAGTTCCAATTTATGGTAGAGGAGCCTCCCACTAATGACAAACTACATGTTGAAGTTGTCAGCACCTCATCGCGAAGTCTACTGCGTCAGAAGGAATCACTGGGTTATGCTGATATCAGTCTTGCGGATGTTGTTACCAACAAGAGAATCAATGAAAGATACCATCTTATAGATTCCAAGAATGGTCGCATCCAAATAGAGTTGCAGTGGAGAGCTTCTTCATTGGCCATCAATTAG 1629 0.4285 MGFFSTIFGVFGFGFGIIFGILAGYFLFIYSQPSNVEDPEIKPLVDQDSPTLQRMIPEIPLWIKNPDFDRIDWLNKLLEYMWPYLDKAICKTAQDIAKPIIAEQIPKYKIDDVVFEVLTLGKLPPTFQGMKVYATEEKELIMEPSLKWAGNPNVTIAVKAFGLKPTIQVLDLQVFLAPRVTLKPLVPSFPCFANIFVSLMEKPHVDFGLKLVGADLMSIPGLYRFVQELIKDQVANMYLWPKTLDVQIMDPAKAMKRPVGILVVKVVRAMKLKKKDLLGASDPYVKLKLLGDNMPSKKTTVKHKNLNPEWNEEFNLVVKDPESQSVEFQVFDWEQVGKHDFMGMNAIALKDLTPEEAKVFNLDLLKNLDANDSQNDKSRGQIVLELTYKPFKEEDMGRGFEETLSMEKAPEGTPPGGGLLVVIVHEAQDVEGKYHTNPQARIIFRGEEKKTKHVKKSRDPRWEEEFQFMVEEPPTNDKLHVEVVSTSSRSLLRQKESLGYADISLADVVTNKRINERYHLIDSKNGRIQIELQWRASSLAIN* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0032 542 PRINTS C2 domain signature 277 289 IPR000008 -
Aev08g0032 542 PRINTS C2 domain signature 304 317 IPR000008 -
Aev08g0032 542 PRINTS C2 domain signature 326 334 IPR000008 -
Aev08g0032 542 Pfam C2 domain 419 520 IPR000008 -
Aev08g0032 542 Pfam C2 domain 260 357 IPR000008 -
Aev08g0032 542 Gene3D C2 domain 255 409 IPR035892 -
Aev08g0032 542 ProSiteProfiles C2 domain profile. 240 362 IPR000008 -
Aev08g0032 542 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 67 249 IPR031468 GO:0008289
Aev08g0032 542 SMART C2_3c 419 517 IPR000008 -
Aev08g0032 542 SMART C2_3c 261 361 IPR000008 -
Aev08g0032 542 ProSiteProfiles C2 domain profile. 398 518 IPR000008 -
Aev08g0032 542 CDD C2 262 355 - -
Aev08g0032 542 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN-RELATED 1 536 - -
Aev08g0032 542 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 256 393 IPR035892 -
Aev08g0032 542 PANTHER EXTENDED SYNAPTOTAGMIN-RELATED 1 536 IPR045050 GO:0008289
Aev08g0032 542 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 418 535 IPR035892 -
Aev08g0032 542 Pfam Synaptotagmin-like mitochondrial-lipid-binding domain 67 247 IPR039010 -
Aev08g0032 542 Gene3D C2 domain 419 537 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0032 Aev-Chr8 177665 181506 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0032 258 516 Lipid Metabolism Gene Families AT3G61300 27.798 3.20e-12 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0032 - - cam:101497090 904.82