Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0012 ATGAAGGGAGGAGGGAAGAGGAAGAGCGAAGCGAGTGGGTGTGAGGAGAGCATAGGGATTGGGATTGAAGAAACCCAAACCCAAACCCTTGTGACTATGAATGGCAATGGCACTCAGAATCAGATTCCCAAGCTTGATGACGGCTTCTACGAAATCGAGGCCATTCGCCGTAAGAGGATCCGCAAGGGTCAGCTCCAGTACCTTATCAAATGGCGTGGATGGCCTGAGACCGCCAACACGTGGGAGCCTCTCGATAATCTGCAGTCAGTTCCTGATGTCATCGATGCTTTCGAGCACGGCCTAAGATCAGGTAAGCCGCAGCGGAGGCGCAAACGCAAGCATGTGGTTCATCACACCCTGCCCAAGAAGAGGCACCACCGCTCCACCACTTCTTACAGCCTTAGACGCTTTCCACCTCCATCCGACATCCATCTTCCCCACTCTGACTCTGCACCTCCTCAGCCTGTCTTCTTTGCTGACGTTGGAGAAGCTAATGTCCATGCCTCCACTCCTGGGTCAGCCCAACAACCTACTCATAATGGGTTTGCAAATCCATCCAACCATCTTGAAATCCATGAGGACAATGATTATGATCCAAAGCTTAGTGAACTCAGAGCAACAACAAACAATGGGATTGATGCTGATCATCCTCCAATACTTGGCCAACAAGCTAACCCCTCGGGGGCACCAAATAGCCACCCTGATGCTGATGCTGATTCCAAAGTGAATTCCACCGACCCTCTTCAGACTGATCGCTGCAGGGGCGCTAAAAGGAGGAAGTCGGGCTCTGTGAAGAGATTCAAGTGCCCACCTGAACCTGTTGATACAAAGAAGGCAAGCAGTATGTCTGTTGTTACCGATGAACCAGGCCGCACAGGACCTCCTGGTGATCCAGGGAATAATAGTCACACAAAGAATGGCAATCCTGGGCATATTGTTAAGATTATAAAGCCAATAGGCTATTCAGCTACTTTATCTGGCAACAGACAGGACGTTTTGGTGACCCTTATTGCTTTGAGGTCTGATGGGGAAGAAGTTATGGTGGATAACAAATATCTAAAGGAACACAATCCACTTCTGCTGATCAATTTCTATGAGCAGCATATCCGGTACATTCCCGTGACTGAACATGTTTAA 1137 0.4925 MKGGGKRKSEASGCEESIGIGIEETQTQTLVTMNGNGTQNQIPKLDDGFYEIEAIRRKRIRKGQLQYLIKWRGWPETANTWEPLDNLQSVPDVIDAFEHGLRSGKPQRRRKRKHVVHHTLPKKRHHRSTTSYSLRRFPPPSDIHLPHSDSAPPQPVFFADVGEANVHASTPGSAQQPTHNGFANPSNHLEIHEDNDYDPKLSELRATTNNGIDADHPPILGQQANPSGAPNSHPDADADSKVNSTDPLQTDRCRGAKRRKSGSVKRFKCPPEPVDTKKASSMSVVTDEPGRTGPPGDPGNNSHTKNGNPGHIVKIIKPIGYSATLSGNRQDVLVTLIALRSDGEEVMVDNKYLKEHNPLLLINFYEQHIRYIPVTEHV* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0012 378 MobiDBLite consensus disorder prediction 103 133 - -
Aev08g0012 378 PANTHER CHROMO DOMAIN-CONTAINING PROTEIN LHP1 27 373 - -
Aev08g0012 378 Gene3D - 38 100 - -
Aev08g0012 378 SMART chromo_7 49 102 IPR000953 -
Aev08g0012 378 PANTHER CHROMO DOMAIN-CONTAINING PROTEIN LHP1 27 373 IPR044251 GO:0006325|GO:0031507
Aev08g0012 378 SMART ChS_2 301 374 IPR008251 GO:0005634
Aev08g0012 378 MobiDBLite consensus disorder prediction 104 131 - -
Aev08g0012 378 MobiDBLite consensus disorder prediction 168 185 - -
Aev08g0012 378 ProSiteProfiles Chromo and chromo shadow domain profile. 50 109 IPR000953 -
Aev08g0012 378 ProSitePatterns Chromo domain signature. 67 87 IPR023779 -
Aev08g0012 378 Pfam Chromo (CHRromatin Organisation MOdifier) domain 50 98 IPR023780 -
Aev08g0012 378 MobiDBLite consensus disorder prediction 208 308 - -
Aev08g0012 378 MobiDBLite consensus disorder prediction 167 194 - -
Aev08g0012 378 SUPERFAMILY Chromo domain-like 39 99 IPR016197 -
Aev08g0012 378 CDD CD_CSD 50 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0012 Aev-Chr8 74802 78045 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0012 - - adu:107478026 423.705