Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aev08g0002 | ATGGCGAGAAATTTCTGTGATTTTCGGTTCCTTCTCTTGGTTGCAGCTGGCGTCTTCATCTATATACAGATGAGACTTTTCGCCACACAATCAGAATATGCTGATCGCCTCGCTGCTGCTATTGAAGCTGAGAACCATTGTACGAGTCAAATGCGATCACTGATCGATCAGATTAGCTCGCAACAAGGACGAATTGTGGCCCTTGAAGAAGAGAGAAAGCGCCAAGATCAAGAATGTGGACAGATGAAATCTCTCGTTCAAGATCTTGAAAGAAAAGACCTACAGAGGCTGATCGACAAAGTGCAGGTTCCAGTGGCAGCTGTTGTGATCATGGCATGTAATCGTGCTGATTACCTGGAGAGGACTATCAATTCTGTATTGAAATACCAAAAGCCCATTTCTTCAAGGTATCCTCTATTTGTATCTCAGGATGGTTCAAATCCAGATGTTAGAACTAAGGCTTTGAGCTATTACCAGTTATCATATATGCAGCACTTAGATTATGTACCAGTTCAAACTGAAAGGCCAGGGGAGTTAATTGCTTACTACAAGATTGCACGCCATTACAAGTGGGCTCTAGATCAGCTGTTTTACAAGCACAATTTCAGCCGGGTAATCATTCTTGAAGATGACATGGAAATAGCACCTGATTTCTTTGATTATTTTGAAGCTACAGCAGCTCTCCTTGACAAGGATAAGTCAATTATGGCTATTTCCTCATGGAATGACAACGGACAAAAGCAGTTTGTACATGACCCATGGTACATCACCCCTAAAGAGGGCAACCCTGGTTCTAGTTTGGGGCAATTTTTTAAGCAATATCTTGAGCCAATCAAGCTGAATGAGGTCCAGGTTGATTGGAAGTCGATGGACTTGAGCTATTTGCTGGAGGACAAATATACCCTGCACTTTGCTGATATTGTTAGCAAAGCTAAACCTGTCTTTGGAACTGACTTGGTTCGAGAGGCAAATAACATAGATGGCGATGTCCGTATTAAGTATAAAGATCAGTCAGACTTTGAAAACATTGCTCGCCAATTTGGTATATTTCAAGAGTGGAAGGATGGTGTGCCCAGGACAGCCTACAAAGGGGTAGTTGTTTTCAGATATCAAACCACAAGGCGTGTACTTCTTGTAGGTCCCAAATCTTTGAAGTTACTCCAGATTGAAGATTCTTAA | 1179 | 0.4198 | MARNFCDFRFLLLVAAGVFIYIQMRLFATQSEYADRLAAAIEAENHCTSQMRSLIDQISSQQGRIVALEEERKRQDQECGQMKSLVQDLERKDLQRLIDKVQVPVAAVVIMACNRADYLERTINSVLKYQKPISSRYPLFVSQDGSNPDVRTKALSYYQLSYMQHLDYVPVQTERPGELIAYYKIARHYKWALDQLFYKHNFSRVIILEDDMEIAPDFFDYFEATAALLDKDKSIMAISSWNDNGQKQFVHDPWYITPKEGNPGSSLGQFFKQYLEPIKLNEVQVDWKSMDLSYLLEDKYTLHFADIVSKAKPVFGTDLVREANNIDGDVRIKYKDQSDFENIARQFGIFQEWKDGVPRTAYKGVVVFRYQTTRRVLLVGPKSLKLLQIEDS* | 393 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aev08g0002 | 392 | Coils | Coil | 51 | 92 | - | - | |
| Aev08g0002 | 392 | Gene3D | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 104 | 309 | IPR029044 | - | |
| Aev08g0002 | 392 | SUPERFAMILY | Nucleotide-diphospho-sugar transferases | 107 | 390 | IPR029044 | - | |
| Aev08g0002 | 392 | PANTHER | PROTEIN O-LINKED-MANNOSE BETA-1,2-N-ACETYLGLUCOSAMINYLTRANSFERASE 1/ALPHA-1,3-MANNOSYL-GLYCOPROTEIN 2-BETA-N-ACETYLGLUCOSAMINYLTRANSFERASE | 261 | 390 | - | - | |
| Aev08g0002 | 392 | PANTHER | PROTEIN O-LINKED-MANNOSE BETA-1,2-N-ACETYLGLUCOSAMINYLTRANSFERASE 1/ALPHA-1,3-MANNOSYL-GLYCOPROTEIN 2-BETA-N-ACETYLGLUCOSAMINYLTRANSFERASE | 1 | 255 | - | - | |
| Aev08g0002 | 392 | Pfam | GNT-I family | 15 | 252 | IPR004139 | GO:0006486|GO:0008375 | |
| Aev08g0002 | 392 | Pfam | GNT-I family | 261 | 389 | IPR004139 | GO:0006486|GO:0008375 | |
| Aev08g0002 | 392 | Gene3D | - | 314 | 389 | - | - | |
| Aev08g0002 | 392 | PANTHER | ALPHA-1,3-MANNOSYL-GLYCOPROTEIN 2-BETA-N-ACETYLGLUCOSAMINYLTRANSFERASE-RELATED | 1 | 255 | - | - | |
| Aev08g0002 | 392 | PANTHER | ALPHA-1,3-MANNOSYL-GLYCOPROTEIN 2-BETA-N-ACETYLGLUCOSAMINYLTRANSFERASE-RELATED | 261 | 390 | - | - |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Aev08g0002 | 1 | 392 | Glycosyltransferase | AT4G38240 | 63.510 | 0.0 | 561 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aev08g0002 | K00726 | - | gmx:100776378 | 672.159 |