Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g2386 ATGGCTTTCGCCACAAGTGCCTTGCTTTCCTCATCATCAAACTTCATCGGAACCAAAGTCCTATTGTCACCTCCAACACCCAAAACAACCAAATCACCATCATCACTGACTCCACCATTCACCTTCAAGACAAGGTTCCTTAACTCTCACAACAAACCAAACCCACAACAATGGAAGAAATCCCTACAATCCCAAGCAGCTTTATCAGCCCTAATCTTATCCTCCTCCCTCACCCCTCAAGCCCTAGCTATAGACACCCCTACACCCCAACCTCCCCCTGTAATAGAAGCTCAGCAGCAGCAAATCCCACCCAGTCAAAATTCATCACCTTTCGCTCAGAACCTTCTTATGACTGCCCCAAAACCTCAGTCCCAGCCATCTTCTGACCTCCCTGAAGGCACCCAATGGCGCTACAGCGAGTTCCTCAACGCCGTCAAGAAGGGGAAGGTCGAGAGGGTCAGGTTCAGCAAGGACGGCTCCGCACTCCAGCTCACCGCCGTCGACGGCCGCCGCGCCACCGTCATCGTCCCCAACGACCCTGACTTAATCGACATCCTCGCCATGAACGGCGTCGACATCTCCGTCTCCGAGGGCGAATCCGGCAACGGCCTCTTCAACTTCATCGGCAACCTCCTCTTCCCCTTCCTCGCCTTCGCCGGCCTCTTCCTTCTCTTCCGCAGGGCCCAGGGCGGGCCTGGTGGGCCAGGCGGGCTCGGAGGGCCCATGGACTTCGGGCGCTCCAAGTCCAAGTTCCAGGAGGTTCCGGAAACAGGGGTGACCTTCGCTGACGTGGCAGGTGCTGACCAGGCAAAGCTGGAATTGCAGGAAGTGGTTGATTTTCTGAAGAATCCTGATAAGTACACTGCTTTGGGTGCTAAGATCCCAAAAGGGTGCCTTCTGGTGGGGCCGCCAGGAACAGGGAAGACCCTTCTGGCTCGTGCGGTTGCGGGTGAGGCTGGCGTGCCTTTCTTCTCATGCGCGGCTTCGGAGTTCGTGGAGCTGTTTGTGGGAGTTGGTGCTTCGCGTGTGAGGGACTTGTTCGAGAAGGCGAAGTCGAAGGCGCCTTGCATTGTGTTCATTGATGAGATTGATGCTGTTGGGAGACAGAGAGGGGCTGGGCTTGGAGGAGGGAATGATGAGAGGGAGCAGACCATTAACCAGCTCTTGACGGAGATGGATGGCTTCTCTGGCAACTCCGGCGTCATCGTTCTGGCTGCCACCAACAGGCCCGATGTTCTTGACTCTGCATTGCTCAGGCCTGGCAGGTTCGATAGGCAGGTTACTGTTGACAGGCCTGATGTTGCTGGTAGAGTTAAGATCCTTCAGGTGCACTCCAGAGGAAAGGCACTTGCAAAGGATGTTGACTTCGAAAAAATAGCACGAAGAACCCCAGGATTCACTGGGGCTGACCTGCAGAATCTGATGAATGAAGCAGCTATTCTTGCAGCCAGGCGTGACCTCAAGGAAATAAGCAAAGATGAGATATCTGATGCCCTTGAGAGGATCATTGCTGGACCAGAAAAGAAGAATGCTGTTGTCTCAGATGAGAAGAAGAAACTAGTGGCCTATCATGAGGCTGGTCATGCTCTAGTTGGTGCTTTGATGCCCGAATATGACCCAGTAGCCAAGATATCAATCATCCCTCGTGGCCAGGCTGGTGGTCTCACATTTTTCGCTCCCAGCGAAGAGAGGCTTGAGTCTGGTCTGTACAGTAGAAGCTACTTGGAAAACCAGATGGCAGTTGCTCTTGGTGGAAGGGTTGCCGAAGAGGTAATTTTTGGGCAGGAAAATGTCACCACAGGAGCATCAAATGACTTTATGCAAGTTTCAAGGGTGGCAAGGCAGATGGTTGAGAGATTTGGATTCAGCAAGAAGATTGGACAAGTTGCAATAGGCGGACCTGGCGGAAATCCATTCTTGGGGCAACAGATGTCAACACAAAAAGATTACTCTATGGCAACTGCCGATGTGGTTGATGCAGAGGTTAGGGAGCTGGTGGAGACAGCCTATTCTAGGGCAAAGCAAATCATAACAACTCACATCGACATCCTTCACAAGCTCGCGCAACTCCTCATCGAGAAGGAGACCGTTGATGGTGAAGAGTTCATGAGCCTATTCATTGACGGGCAAGCTGAGTTATATGTTGCCTAA 2151 0.5272 MAFATSALLSSSSNFIGTKVLLSPPTPKTTKSPSSLTPPFTFKTRFLNSHNKPNPQQWKKSLQSQAALSALILSSSLTPQALAIDTPTPQPPPVIEAQQQQIPPSQNSSPFAQNLLMTAPKPQSQPSSDLPEGTQWRYSEFLNAVKKGKVERVRFSKDGSALQLTAVDGRRATVIVPNDPDLIDILAMNGVDISVSEGESGNGLFNFIGNLLFPFLAFAGLFLLFRRAQGGPGGPGGLGGPMDFGRSKSKFQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGLGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFEKIARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGRVAEEVIFGQENVTTGASNDFMQVSRVARQMVERFGFSKKIGQVAIGGPGGNPFLGQQMSTQKDYSMATADVVDAEVRELVETAYSRAKQIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGQAELYVA* 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g2386 716 Gene3D Peptidase M41 508 711 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Aev07g2386 716 Pfam ATPase family associated with various cellular activities (AAA) 299 430 IPR003959 GO:0005524|GO:0016887
Aev07g2386 716 Hamap ATP-dependent zinc metalloprotease FtsH [ftsH]. 1 716 IPR005936 GO:0004176|GO:0004222|GO:0016020
Aev07g2386 716 Pfam AAA+ lid domain 453 496 IPR041569 -
Aev07g2386 716 SUPERFAMILY FtsH protease domain-like 512 706 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Aev07g2386 716 Gene3D - 249 431 IPR027417 -
Aev07g2386 716 MobiDBLite consensus disorder prediction 82 112 - -
Aev07g2386 716 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 258 502 IPR027417 -
Aev07g2386 716 ProSitePatterns AAA-protein family signature. 401 419 IPR003960 GO:0005524|GO:0016887
Aev07g2386 716 Pfam Peptidase family M41 512 705 IPR000642 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Aev07g2386 716 PANTHER ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 1, CHLOROPLASTIC-RELATED 60 708 - -
Aev07g2386 716 Gene3D - 432 507 - -
Aev07g2386 716 CDD AAA 265 430 - -
Aev07g2386 716 PANTHER METALLOPROTEASE M41 FTSH 60 708 - -
Aev07g2386 716 Gene3D - 131 202 - -
Aev07g2386 716 SMART AAA_5 294 433 IPR003593 -
Aev07g2386 716 TIGRFAM FtsH_fam: ATP-dependent metallopeptidase HflB 205 705 IPR005936 GO:0004176|GO:0004222|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g2386 Aev-Chr7 24565798 24568811 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g2386 255 707 Miscellaneous Gene Families AT5G53170 49.780 1.69e-136 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g2386 K03798 - rcu:8267886 1160.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev07g2386 07 24565798 24568811 Aev07g2386 07 24565798 24568811 ECH