Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g2278 ATGGCCTCTGTTTCAGTGTCATCACCACTCTGCATGCTTTTCTTCTTCTTCTCCTTCTTCTTCTTCAACTTCTCCTTTTGTGCCAAATTAAACCATAACAACAACAACAGCGATTCATTCTCAATCTTTTTCCCTCTTACAACAAAGAAACTCTCAAATCCAAACAATAACAAAAACAACATGAACATCCACAAAAATCTTAGGACACTCTCTTCTTCCAACAACGTTAAATCAACCTTCAAAATCAAATACTCATCCATGGCACTTGTCGTGTCCCTTCCAATAGGAACCCCTCCACAGCTTCAACAAATGGTATTAGACACCGGAAGCCAACTCTCATGGGTTCAGTGCGCTCCAAAACAAATAAAATCTCCTCCAACGACGTCGTTTAACCCTTCACTCTCTTCCTCTTTCTCTATTCTCCCCTGTACCCACCCTGTTTGCAAGCCGCGAATTCCGATTTACCCTCCCACTACCTGCGACCAGAATCGCATGTGCCACTACTCCTACTTCTACGCCGACGGTACTTACGCTGAGGGCAATCTCGTCAGAGAAAAACTAGCCCTCTCAAATTCCCAAACTACCCCTCCTCTAATCCTGGGCTGCACCACCGAGCAGCCCAGCGATGCGAGGGGAATTTTGGGAATGAATCTCGGTCGTCTTTCCTTCCCTTCTCAAGCCCAAATCACGAAATTCTCTTATTGCGTCCCGACCCGATCGGCCCGAACCGGAACCGGTTCGTTCTATCTTGGGAATAATCCGGGTTCAGGACGGTTTCGTTATGTTGACTTGTTGACTTTTGGTCAAAGTCAACGCATGCCGAATCTAGACCCTTTAGCATTCACTGTTCCAATGGAAGGATAA 864 0.4595 MASVSVSSPLCMLFFFFSFFFFNFSFCAKLNHNNNNSDSFSIFFPLTTKKLSNPNNNKNNMNIHKNLRTLSSSNNVKSTFKIKYSSMALVVSLPIGTPPQLQQMVLDTGSQLSWVQCAPKQIKSPPTTSFNPSLSSSFSILPCTHPVCKPRIPIYPPTTCDQNRMCHYSYFYADGTYAEGNLVREKLALSNSQTTPPLILGCTTEQPSDARGILGMNLGRLSFPSQAQITKFSYCVPTRSARTGTGSFYLGNNPGSGRFRYVDLLTFGQSQRMPNLDPLAFTVPMEG* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g2278 287 Pfam Xylanase inhibitor N-terminal 90 252 IPR032861 -
Aev07g2278 287 PANTHER ASPARTYL PROTEASE-RELATED 12 287 IPR001461 GO:0004190|GO:0006508
Aev07g2278 287 SUPERFAMILY Acid proteases 84 267 IPR021109 -
Aev07g2278 287 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 104 115 IPR001969 GO:0004190|GO:0006508
Aev07g2278 287 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 12 287 - -
Aev07g2278 287 ProSiteProfiles Peptidase family A1 domain profile. 89 287 IPR033121 -
Aev07g2278 287 Gene3D Acid Proteases 63 252 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g2278 Aev-Chr7 23690836 23691699 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g2278 91 253 Miscellaneous Gene Families AT1G44130 30.000 1.35e-14 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g2278 - - gmx:100790706 357.836
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev07g2278 07 23690836 23691699 Aev07g2278 07 23690836 23691699 ECH
Aev03g0717 03 5451794 5453134 Aev07g2278 07 23690836 23691699 PCT