Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g2254 ATGGCGAGAAAAGGAGGGAAAGGCCTTGTAGCTGGAAAAACCACCAAGGACAAGGACAAAGACAAGGATAAGAAAAAACATGTTACCCGTTCATCCCGTGCTGGAATTCAGAGTTCTCACCTAACATTCCCTTTCTCTTCTCTCTTCTCTTCGCAACTCTCAGATCGGAAAATCAAAACCATGGCGTTCCACAAGATCAAGGTCGCTAATCCCATCGTCGAGATGGACGGAGATGAAATGACCCGAGTTATCTGGAAGTCAATCAAGGACAAGCTCATTTTGCCCTTCTTGGAGTTGGACATCAAGTACTTTGACTTGGGCCTTCCTTACCGTGATGAGACCGATGATAAAGTTACAGTCGAGAGTGCTGAAGCAACTCTTAAGTATAATGTAGCAATCAAGTGTGCAACTATCACTCCAGATGAAGCTCGTGTGAAGGAGTTTGGCCTGAAGAGTATGTGGAAGAGTCCAAATGGAACAATTAGGAACATTTTGAATGGAACTGTCTTCAGAGAACCAATTCTTTGCAAGAATATCCCTCGCCTTGTTCCTGGTTGGACGAAGCCAATATGCATTGGAAGACATGCTTTTGGTGATCAATATCGGGCCACTGACACAGTTATCAAAGGAGCTGGGAAATTGAAGCTGGTGTTCGTTCCAGAAGGCCAAGGTGAGAAGACCGAATTAGAGGTTTTTAACTTCACTGGTGAAGGAGGTGTTTCACTGGCTATGTACAACACTGATGAGTCTATCCGTTCTTTTGCTGATGCTTCCATGGCAACTGCTTATGAGAAGAAGTGGCCTCTTTATCTCAGCACCAAAAACACAATTCTTAAGAAATATGATGGAAGATTCAAGGACATTTTCCAAGAAGTTTATGAGGCACACTGGAAATCCAAGTATGAGGCTGCTGGCATCTGGTATGAACATCGGCTGATTGATGATATGGTGGCGTATGCACTCAAGAGTGATGGAGGCTATGTATGGGCATGCAAAAACTATGATGGAGATGTCCAGAGTGATTTCCTAGCTCAAGGCTTTGGATCATTGGGTTTGATGACATCTGTATTGGTTTGCCCTGATGGAAAGACTATTGAAGCAGAAGCAGCCCACGGCACAGTTACTCGTCATTTTAGGGTTCATCAGAAAGGTGGGGAAACCAGCACAAACAGCATTGCATCCATCTTTGCTTGGACGAGAGGGCTAGCCCACAGGGCAAAACTTGATGACAATGCAAAACTGTTGGAGTTCACTCAAAAACTAGAGGCAGCTTGCATTGGAGTTGTGGAATCTGGGAAGATGACCAAGGATTTGGCACTTATTCTTCACGGATCCAAGCTTTCAAGGGAGCACTATCTGAACACAGAGGAGTTCATCGATGCCGTGGCAGACGAGCTGAGATCAAGTCTTTCTGCCTAG 1419 0.4489 MARKGGKGLVAGKTTKDKDKDKDKKKHVTRSSRAGIQSSHLTFPFSSLFSSQLSDRKIKTMAFHKIKVANPIVEMDGDEMTRVIWKSIKDKLILPFLELDIKYFDLGLPYRDETDDKVTVESAEATLKYNVAIKCATITPDEARVKEFGLKSMWKSPNGTIRNILNGTVFREPILCKNIPRLVPGWTKPICIGRHAFGDQYRATDTVIKGAGKLKLVFVPEGQGEKTELEVFNFTGEGGVSLAMYNTDESIRSFADASMATAYEKKWPLYLSTKNTILKKYDGRFKDIFQEVYEAHWKSKYEAAGIWYEHRLIDDMVAYALKSDGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNAKLLEFTQKLEAACIGVVESGKMTKDLALILHGSKLSREHYLNTEEFIDAVADELRSSLSA* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g2254 472 MobiDBLite consensus disorder prediction 1 33 - -
Aev07g2254 472 MobiDBLite consensus disorder prediction 10 30 - -
Aev07g2254 472 PIRSF IDH_NADP 45 472 IPR004790 GO:0004450|GO:0006102
Aev07g2254 472 Gene3D Isopropylmalate Dehydrogenase 63 472 - -
Aev07g2254 472 SMART Iso_dh_2 71 462 IPR024084 -
Aev07g2254 472 ProSitePatterns Isocitrate and isopropylmalate dehydrogenases signature. 333 352 IPR019818 GO:0000287|GO:0016616|GO:0051287
Aev07g2254 472 TIGRFAM nadp_idh_euk: isocitrate dehydrogenase, NADP-dependent 65 471 IPR004790 GO:0004450|GO:0006102
Aev07g2254 472 PANTHER NADP-SPECIFIC ISOCITRATE DEHYDROGENASE 62 472 IPR004790 GO:0004450|GO:0006102
Aev07g2254 472 Pfam Isocitrate/isopropylmalate dehydrogenase 67 462 IPR024084 -
Aev07g2254 472 PANTHER ISOCITRATE DEHYDROGENASE [NADP] 62 472 - -
Aev07g2254 472 SUPERFAMILY Isocitrate/Isopropylmalate dehydrogenase-like 63 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g2254 Aev-Chr7 23485890 23496336 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g2254 K00031 - gmx:100791166 800.431
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev07g2254 07 23485890 23496336 Aev07g2254 07 23485890 23496336 ECH