Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g1847 ATGCAACCTATAAATAGAGACACACCACCACTAGATAGCCCTCCTTCATCACCACCACTAGCAAAAGAACCACTACTAAAATTACCACAATACCCTCAATCACCACCACCAGAACCATACCAATCCCTCAAATATGATGATCATAACAACAATGAGCACATGATTCTTTATAAAGATGTGTTTGATGAAACTTCACAAATGATAAATTCCAAAAATACCCCACCATTGGATGAATCATACCTCAAGTTGTGGGTTTCAAAATTGATCAATACAAAACCACCAAAAGAAGAAGAAATAGACACTAAAAACAACAATGTTTCTGGCCAATATTCAACACCTATTACTCCTCCAGCACCTTGTTCATCTCCAACGACACAAACAGTGACAAATTGTATCAATTTCGAGAATGTGCTTATGAATATTCATCAGATTCATTTTGACCTCAATAGAAGTGATGATGAAGGTTTTATGGTCATTTCTCCATCTGAGAATGACATTATTAATCATCACCTTGGAAACTTTGATAACATTGGGGCTCCTTGTGATTTTGCTGGTACACCCTCAACAACAATGATGGGTGCAGGGCTTGTGAATCTTGGTAACATGTGCTTCATGAATGTTATCTTGCAGTGCTTCACTCACACAGTGCCATTCGTGCATGAACTTCGTTCTTGCTCTCACGTCACACCTTGTGAGGATTATACCAATGATTATGCTAGATTATGTGTCATTTGTGTATTGCGCCAGCACATTGAAACCTGCATAGCATGTTCAGGAGGAGTTGTTTGTCCAGTAGGACTTGTTGATAATTTGGGGAATTTTTCTTCTTCTTTTAGAAGATACCAGCAGAGTGATGCACATGAATTTATGTTGTCTCTCGTAAATAAACTCCAAAGATGTTTCCTAGAAGGAGAAGAAAATGTGATTGACAAAGTATTTGGAGGTCTTCTTCTTAGCAAGCTACAATGTTGTAGTTGTGCACATTCCTCTAACTCTTATGAGCCAATGATCGACATGAGTTTGGAAATAGAAGATGTAAACACCATCCAACATGCACTTAACTCCTTTACCGTGGTGGAGAAGATGGATGAGAAGTTCACATGTGATGGTTGTTTGAAACAAGTGTCCATGGAGAAGCAACTCATGTTGAATAAAGCACCAATGGTTCTAGTATTTCACTTGAAAAGGTTTAAGAATGCAAGGGACTACGTTAAGAAAATTGAAGCTCATGTAAATTTCACATTGGACCTTGATTTGGAGCCTTATACCACAAGGAATCCCAATGATAATGTAGGGGAAATTTTGAAGTATGATCTATATGCACTTGTTGTTCATGAGGGATCTAACCCAAGTTCCGGACATTATTATTGTTTCATTCGCTCTGCTCCAGAGAAGTGGCATAAGTTTGATGATGATCAGGTTACTAGTGTGTCTAGAGATTATGTGCTTGGTCAACAAGCATACATATTATTTTATGTGAAGCAAGGCATACCATGGTTCTCTTCAAGTATTATAAAAAGTGATGAAAATCCTAAGGAATTGAACCCATGTTTTGATGATGGTGTGATGGATGAGAAAAAGCCCAATTCTTATGATAGAAACTTTGATGATGATCCAATGGATATTTATGCCTATGAGGAAAAGAAGAATGAAGGCGAGTAG 1662 0.3773 MQPINRDTPPLDSPPSSPPLAKEPLLKLPQYPQSPPPEPYQSLKYDDHNNNEHMILYKDVFDETSQMINSKNTPPLDESYLKLWVSKLINTKPPKEEEIDTKNNNVSGQYSTPITPPAPCSSPTTQTVTNCINFENVLMNIHQIHFDLNRSDDEGFMVISPSENDIINHHLGNFDNIGAPCDFAGTPSTTMMGAGLVNLGNMCFMNVILQCFTHTVPFVHELRSCSHVTPCEDYTNDYARLCVICVLRQHIETCIACSGGVVCPVGLVDNLGNFSSSFRRYQQSDAHEFMLSLVNKLQRCFLEGEENVIDKVFGGLLLSKLQCCSCAHSSNSYEPMIDMSLEIEDVNTIQHALNSFTVVEKMDEKFTCDGCLKQVSMEKQLMLNKAPMVLVFHLKRFKNARDYVKKIEAHVNFTLDLDLEPYTTRNPNDNVGEILKYDLYALVVHEGSNPSSGHYYCFIRSAPEKWHKFDDDQVTSVSRDYVLGQQAYILFYVKQGIPWFSSSIIKSDENPKELNPCFDDGVMDEKKPNSYDRNFDDDPMDIYAYEEKKNEGE* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g1847 553 Gene3D Cysteine proteinases 191 497 - -
Aev07g1847 553 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 194 495 IPR028889 -
Aev07g1847 553 MobiDBLite consensus disorder prediction 1 46 - -
Aev07g1847 553 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 164 502 - -
Aev07g1847 553 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 195 210 IPR018200 GO:0004843|GO:0006511
Aev07g1847 553 MobiDBLite consensus disorder prediction 515 538 - -
Aev07g1847 553 SUPERFAMILY Cysteine proteinases 192 494 IPR038765 -
Aev07g1847 553 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 164 502 - -
Aev07g1847 553 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 437 455 IPR018200 GO:0004843|GO:0006511
Aev07g1847 553 Pfam Ubiquitin carboxyl-terminal hydrolase 195 492 IPR001394 GO:0004843|GO:0016579
Aev07g1847 553 MobiDBLite consensus disorder prediction 8 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g1847 Aev-Chr7 19591525 19597080 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g1847 195 532 Miscellaneous Gene Families AT4G31670 32.958 1.75e-47 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g1847 K11855 - gmx:100808015 380.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev07g1847 07 19591525 19597080 Aev07g1847 07 19591525 19597080 ECH