Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g1349 ATGGAGGAAGATCAAATAGATGGATTTGTGAGCGCGTATTTGAAGAAGAAAGGGTTTGCGCAAAACGACGAGCTTCAATCCAACAACAACAACAACAACGGTTCCTCTGCTAATTCTCTTCTTCAATCCAACATTCTCAATCGCTTCCAAGCCCAATCCCAATTGGAGCGTGATTCTGCAAGATATCATTATGGGTATGGAAGACTTCGAGCGATGGCATATAGGTCACTAGACTTGTATAAGCATGAATTGTTATGTGTGCTATATCCAGTATTTATCAATTGCTTCATGGATCTTGTCACAAAAGGGCATCTTCAAGAAGCACAGAGTTTTTTCAATACATTCCGTGAAGACCATGAAGTAAGGCACCTACGAGACCTTCAAAAGTTGGAAGGAATTCTTTCTCCTACTCATCTCGAGGAAATGGAGTTTGCTCATTCCCTTAGGCAGAGTAAATTCAACATAAAGATAAGCGGGTATTCCTATGAACTGCTGTTGCAACATCTACACAGTACAAAATCCACTGCTATACTTGGTATAATCAATAAGCATATTAGCTTTGAAGTTACCACTGGACAACCTAGCTCAATATCTGATGATACAGAAGCTGTTACCCTCACCGGAAGCAACCGGGATGCATCGAACCAGATAAATCAGAAAGAAATACATTGGGGGTTGCTTGATGATTCTCTTGAAGATCGGATGTTGCTTTTAGACAATGACAAAGGTGACAGGGAAGCCAAAGAGGGGGAGAATGAGGAGAGTAAGAAAAGGCCAGCTGATGGAGGAAAGCAAGGTGGTTCAATTAAAAAGGTGAAAAAGGACAAGGCAGGAAGTGCAACAGCAAAAAGTGCAAAACCTGAAGCTAACACTGCATCAACAGCACATCGTGGAAAACCAGAACTTCCCTTGCCCACAATTTCGACCGAGGTTGAGTTGTCTATCCTTGAAGATTTGAGGAATCGTGTACAGTTGAGTAGTGTTGCACTGCCATCGGTCAACTTCTACACATTCATTAATTCACATAATGGATTAAACTGTTCATCAATATCCCATGATGGATCATTGGTTGCTGGAGGGTTTTCTGACTCATCAGTAAAGGTTTGGGATATGGCAAAGATCGGACAACAACCCACCAATTCTCGTTCACAGGTAGAGAATGACACATTGCAAAATGAACAGATGCTTGGCCAAAATGGTGGGAAAAGGCAGTACAAATTGTTTCAAGGTCATTCAGGGCCAGTTTATGCAGCCACTTTTAGTCCCCTTGGGGATTTTGTTCTTTCCTCTTCAGCAGACAAAACAATTCGATTGTGGAGTACAAAGCTTAACTCCAATCTCGTTTGTTACAAGGGTCACAATTACCCTGTTTGGGATGTTCAGTTTAGTCCTGCAGGGCATTATTTTGCCAGCACTTCACATGACAGAACCGCTCGGGTTTGGTCCATGGACAGAATACATCCCTTAAGAATTATGGCAGGGCACTTGTCAGATGTTGATTGTGTGAAGTGGCATCCCAACTGCAACTACATCGCTACTGGCTCCAGCGACAGGTCAGTTCGACTATGGGATGTGCAGAGTGGGCAAAATGTTCGGGTTTTCAAGGGTCACAGGAGTATGATTCTGTCTTTGGCGATGTCTCCTGACGGTCGCTATATGGCATCTGGTGATGAAGACGGGACAATCATGATGTGGGACCTCTCTACTGGCTCCTGCCTCACACCATTGATTGGCCACACTTCATGCATCTGGTCGCTCGCTTTCAGCTGTGAAGGTTCTCTTCTAGCATCTGGATCTGCTGACTGCACTATAAAATTTTGGGATGTAACTACGGGAATGAAGGTTCCAAGGAATGAAGAAAATAGAAGTGGCAATACGAGCAGACTCAGACCATTGAAAAACCTATCAACCAAATCTACTTCAGTTCTCTCTTTGCAGTTTTCCCGAAGGAATCTACTTTTTGCAGCTGGAGCTCCTGTGAAAAGTGGTTAA 1992 0.4332 MEEDQIDGFVSAYLKKKGFAQNDELQSNNNNNNGSSANSLLQSNILNRFQAQSQLERDSARYHYGYGRLRAMAYRSLDLYKHELLCVLYPVFINCFMDLVTKGHLQEAQSFFNTFREDHEVRHLRDLQKLEGILSPTHLEEMEFAHSLRQSKFNIKISGYSYELLLQHLHSTKSTAILGIINKHISFEVTTGQPSSISDDTEAVTLTGSNRDASNQINQKEIHWGLLDDSLEDRMLLLDNDKGDREAKEGENEESKKRPADGGKQGGSIKKVKKDKAGSATAKSAKPEANTASTAHRGKPELPLPTISTEVELSILEDLRNRVQLSSVALPSVNFYTFINSHNGLNCSSISHDGSLVAGGFSDSSVKVWDMAKIGQQPTNSRSQVENDTLQNEQMLGQNGGKRQYKLFQGHSGPVYAATFSPLGDFVLSSSADKTIRLWSTKLNSNLVCYKGHNYPVWDVQFSPAGHYFASTSHDRTARVWSMDRIHPLRIMAGHLSDVDCVKWHPNCNYIATGSSDRSVRLWDVQSGQNVRVFKGHRSMILSLAMSPDGRYMASGDEDGTIMMWDLSTGSCLTPLIGHTSCIWSLAFSCEGSLLASGSADCTIKFWDVTTGMKVPRNEENRSGNTSRLRPLKNLSTKSTSVLSLQFSRRNLLFAAGAPVKSG* 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g1349 663 ProSitePatterns Trp-Asp (WD) repeats signature. 553 567 IPR019775 -
Aev07g1349 663 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 576 612 - -
Aev07g1349 663 Gene3D - 239 487 IPR015943 GO:0005515
Aev07g1349 663 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID 1 658 IPR037783 -
Aev07g1349 663 ProSiteProfiles Trp-Asp (WD) repeats profile. 338 371 IPR001680 GO:0005515
Aev07g1349 663 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 408 440 - -
Aev07g1349 663 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 492 529 - -
Aev07g1349 663 ProSitePatterns Trp-Asp (WD) repeats signature. 357 371 IPR019775 -
Aev07g1349 663 Gene3D TFIID subunit TAF5, NTD2 domain 41 190 IPR037264 -
Aev07g1349 663 MobiDBLite consensus disorder prediction 243 281 - -
Aev07g1349 663 ProSiteProfiles Trp-Asp (WD) repeats profile. 576 617 IPR001680 GO:0005515
Aev07g1349 663 ProSiteProfiles Trp-Asp (WD) repeats profile. 534 575 IPR001680 GO:0005515
Aev07g1349 663 SMART WD40_4 569 608 IPR001680 GO:0005515
Aev07g1349 663 SMART WD40_4 485 524 IPR001680 GO:0005515
Aev07g1349 663 SMART WD40_4 332 370 IPR001680 GO:0005515
Aev07g1349 663 SMART WD40_4 401 440 IPR001680 GO:0005515
Aev07g1349 663 SMART WD40_4 527 566 IPR001680 GO:0005515
Aev07g1349 663 SMART WD40_4 443 482 IPR001680 GO:0005515
Aev07g1349 663 MobiDBLite consensus disorder prediction 243 305 - -
Aev07g1349 663 SUPERFAMILY WD40 repeat-like 332 657 IPR036322 GO:0005515
Aev07g1349 663 Gene3D - 488 568 IPR015943 GO:0005515
Aev07g1349 663 Gene3D - 569 659 IPR015943 GO:0005515
Aev07g1349 663 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 450 484 - -
Aev07g1349 663 Pfam WD domain, G-beta repeat 340 370 IPR001680 GO:0005515
Aev07g1349 663 Pfam WD domain, G-beta repeat 528 566 IPR001680 GO:0005515
Aev07g1349 663 Pfam WD domain, G-beta repeat 488 524 IPR001680 GO:0005515
Aev07g1349 663 Pfam WD domain, G-beta repeat 446 482 IPR001680 GO:0005515
Aev07g1349 663 Pfam WD domain, G-beta repeat 570 608 IPR001680 GO:0005515
Aev07g1349 663 Pfam WD domain, G-beta repeat 408 440 IPR001680 GO:0005515
Aev07g1349 663 ProSitePatterns Trp-Asp (WD) repeats signature. 511 525 IPR019775 -
Aev07g1349 663 PRINTS G protein beta WD-40 repeat signature 511 525 IPR020472 -
Aev07g1349 663 PRINTS G protein beta WD-40 repeat signature 427 441 IPR020472 -
Aev07g1349 663 PRINTS G protein beta WD-40 repeat signature 595 609 IPR020472 -
Aev07g1349 663 Pfam WD40 associated region in TFIID subunit, NTD2 domain 57 185 IPR007582 -
Aev07g1349 663 ProSiteProfiles Trp-Asp (WD) repeats profile. 492 533 IPR001680 GO:0005515
Aev07g1349 663 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 534 571 - -
Aev07g1349 663 SUPERFAMILY Taf5 N-terminal domain-like 50 190 IPR037264 -
Aev07g1349 663 CDD TAF5_NTD2 62 190 IPR007582 -
Aev07g1349 663 PANTHER CANNONBALL-RELATED 1 658 - -
Aev07g1349 663 ProSitePatterns Trp-Asp (WD) repeats signature. 595 609 IPR019775 -
Aev07g1349 663 ProSiteProfiles Trp-Asp (WD) repeats profile. 408 440 IPR001680 GO:0005515
Aev07g1349 663 ProSiteProfiles Trp-Asp (WD) repeats profile. 450 491 IPR001680 GO:0005515
Aev07g1349 663 CDD WD40 408 658 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g1349 Aev-Chr7 12220236 12231728 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g1349 475 612 Miscellaneous Gene Families AT5G08390 30.435 2.34e-20 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g1349 K03130 - gmx:100790500 1032.32