Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g1309 ATGTTCAAAAGAAACCCTTCATACACAAATCCAGAACCCTGTCAGCACCTTGTTGATTACAAGCTCAAGCATGGCTTCAATGGCTACAAAGCAATTCAGAAGCTTCTTGTGACAACCCCAATTGGGAGAACAAGTGTGAAGAAACCAAACACAACGGTACCCAGATGCAATTTCTGTAATGGGTCTGAAGGGAGGTTCTATTTGTGCTTGATTTGCAATTCAATCTCATGTTTGGATCATACCCTTTTGCACCCTCAATCTGATTCCGGTCATACTATGTTTGTGGACATAGAAAGGGCTGAACTTTTTTGTGGGGTGTGCAGTGATCAAATTTATGACCCTAATTTTGACCAAATTGTTGTGTCTAAGCACTCATTTGTTGTAGCAAAAGGTGTTACTTTGAATGAGAGCATTGGTCAGAGATTGATCAAGAGGAGGAGATTGGTTTCTGGGGTTGGATTTGATTTGCAGAAATCAAAGTTTAGGGTCCCAATAAGGGATCTTAAGGCCAAATCTTGTTACCCAATTGGTTTGAGGGGTTTGAACAATTTGGGTAGCACATGCTTCATGAATTCTGTATTGCAGGCATTGCTTCATGCTCCTCCTTTCAGGGACTATTTCCTGAGTGGTGGACACCGTTTTGAGGCTTGTCAGAGAAGAATCAAGGATCGGGTGTGTTTGCTTTGTGATGTCAATGATATATTCTCAGCTGTGTTTTCAGGAGATAGGAATCCATATAGCCCTGCTCAGTTTCTCTACAGCTGGTGGCAGCATTCAGCAAATTTAGCAAGTTATGAGCAGCAGGATGCTCATGAGTTTTTCATTTCCTTGTTAGACGCTATCCATGAGAAAGAGGGCAAAACAAGGAACGGAATCCGAGGTAATGGAGACTGCCAATGTATTGCTCATACAGTGTTCTCTGGACTATTGAAATCAGATGTTACCTGTATGGCCTGTGGATTCACCTCAACAACCTATGACCCTTGTGTGGACATTTCACTTAACTTGGACACAAATTTGTCTTTAACAGAAAAGGGTAAAAAGGTTACCAAACAAAATGAGGATGGGATTATGTCTACACTTTTTGGTTGTTTGGATTTTTTCACTAGGCCAGAGAAGTTGGGGTCAGACCAGAAACTCTACTGCCAGAATTGTCAAGAAAGGCAAGACTCGTTGAAGCAAATGTCTATTGGCAAGCTTCCGTTGGTACTTAGTCTGCACGTGAAACGTTTCGAGCACTCCCTCGCCAAAAAGTTGTCGAGAAAAATAGATCGCTACATACATTTCCCTTTTTCCTTAGACATGACCCCATATTTGTCTTCTTCAATCCTCAGAGCCAGATATGGAAACCGAATTTTTTCTTTTGGGGGTGATGAATCAGATATGTTTTCTGAATACGAGATTTTTGCGGTGGTGACACATTCAGGGACACTTGAGTCAGGTCATTATGTTTCTTTTGTGCGCATAAAGAAGCAATGGTACAAATGTGATGATGCTTGGATAACTGAAGTTGATGAGGCAACAGTAAGAGCTTCACAGTGTTACATGATCTTCTATGTGCAGAAAACTCTGTACAATAAAGCCAATGAAGATCCGAATCATGCGCCGAAGTCTCGCGAAAGAGATCCATTTCTTTCTATAATTGGATGTTGCTAA 1656 0.413 MFKRNPSYTNPEPCQHLVDYKLKHGFNGYKAIQKLLVTTPIGRTSVKKPNTTVPRCNFCNGSEGRFYLCLICNSISCLDHTLLHPQSDSGHTMFVDIERAELFCGVCSDQIYDPNFDQIVVSKHSFVVAKGVTLNESIGQRLIKRRRLVSGVGFDLQKSKFRVPIRDLKAKSCYPIGLRGLNNLGSTCFMNSVLQALLHAPPFRDYFLSGGHRFEACQRRIKDRVCLLCDVNDIFSAVFSGDRNPYSPAQFLYSWWQHSANLASYEQQDAHEFFISLLDAIHEKEGKTRNGIRGNGDCQCIAHTVFSGLLKSDVTCMACGFTSTTYDPCVDISLNLDTNLSLTEKGKKVTKQNEDGIMSTLFGCLDFFTRPEKLGSDQKLYCQNCQERQDSLKQMSIGKLPLVLSLHVKRFEHSLAKKLSRKIDRYIHFPFSLDMTPYLSSSILRARYGNRIFSFGGDESDMFSEYEIFAVVTHSGTLESGHYVSFVRIKKQWYKCDDAWITEVDEATVRASQCYMIFYVQKTLYNKANEDPNHAPKSRERDPFLSIIGCC* 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g1309 551 PANTHER UBIQUITIN C-TERMINAL HYDROLASE 22 6 546 - -
Aev07g1309 551 SUPERFAMILY Cysteine proteinases 175 521 IPR038765 -
Aev07g1309 551 ProSiteProfiles Zinc finger UBP-type profile. 12 130 IPR001607 GO:0008270
Aev07g1309 551 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 6 546 - -
Aev07g1309 551 SUPERFAMILY RING/U-box 13 119 - -
Aev07g1309 551 Gene3D Cysteine proteinases 174 527 - -
Aev07g1309 551 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 8 131 IPR013083 -
Aev07g1309 551 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 179 522 IPR028889 -
Aev07g1309 551 Pfam Zn-finger in ubiquitin-hydrolases and other protein 56 115 IPR001607 GO:0008270
Aev07g1309 551 Pfam Ubiquitin carboxyl-terminal hydrolase 180 519 IPR001394 GO:0004843|GO:0016579
Aev07g1309 551 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 180 195 IPR018200 GO:0004843|GO:0006511
Aev07g1309 551 CDD Peptidase_C19D 179 520 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g1309 Aev-Chr7 11805932 11808752 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g1309 180 519 Miscellaneous Gene Families AT2G24640 29.310 4.21e-35 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g1309 K11366 - gmx:100806347 969.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev07g1309 07 11805932 11808752 Aev07g1309 07 11805932 11808752 ECH