Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g1057 ATGGGTGAAGCTCCTCAAGTTTTCTATGTTAATGGGTTCTCAAAGTTTGGCCATGAAACTCAACAAAACCACCATAGCAATAATAATAATGATGTTCATCACAACCATCATGATCATGATTCTTCATGGTATGAAGAAGTCATTGATGATGATCTCAAATGGTCCTTTAAACTCAACAGGGTACTTCATAAAGGGGTTAGCAAATACCAAGACATAGCTCTCTTAGATACAAAGCGTTTTGGAAAGGCCTTGATGATTGATGGGAAGATGCAAAGTGCTGAATCGGATGAATTCATTTATCATGAATGCTTGATTCATCCCTCTCTTTTATGTCACCCCAATCCCAAAAAGGTGTTTATTATGGGAGGTGGTGAAGGTTCTTCTGCTAGGGAAGTCCTCAAGCACAAGTCAATGGACAGAGTTGTTATGTGCGATATAGATCAGGAGGTGGTAGATTTCTGTCGGAAATACTTGACAGTAAATAGGGACACATTTTTTCACAAGAAGCTTGACCTTGTCATCAATGATGCCAAGGCTGAGTTGGAGAAGAGAAAGGAGAAGTATGATGTAATTGTTGGAGATTTGGCCGACCCACTTGAAGATGGGCCTTGCTATCAGCTCTACACCAAATCCTTCTATGAGAAAATCCTCAAGCCCAAACTCAATCATAATGGCATTTTTGTCACCCAGGCTGGACCAGCAGGTATATTCACACACAAGGAGGTCTTCACTTCCATATATAACACAATCAAACAGGTCTTCAAATATGTGATGGTATATGCCACTCATGTACCATCCTTTGCTGATACATGGGGATGGGTTATGGCTTCTGATCAACCATTATCAATTGGTGCTGAGGAAATGGACAAAAGAATCGAAGCAAGGATAGATGGAGAATTGCTCTATCTAAATGGTGCTTGGTTCCAATCCTCTGCTACTATGAACAAGACTGTTTCACAATCGTTGCAGAATGAAACTCATGTGTACACCGAAGAAAACGCTAGATTTATTCCGGGACATGGTGTGGCATATCGCATCTAA 1041 0.4063 MGEAPQVFYVNGFSKFGHETQQNHHSNNNNDVHHNHHDHDSSWYEEVIDDDLKWSFKLNRVLHKGVSKYQDIALLDTKRFGKALMIDGKMQSAESDEFIYHECLIHPSLLCHPNPKKVFIMGGGEGSSAREVLKHKSMDRVVMCDIDQEVVDFCRKYLTVNRDTFFHKKLDLVINDAKAELEKRKEKYDVIVGDLADPLEDGPCYQLYTKSFYEKILKPKLNHNGIFVTQAGPAGIFTHKEVFTSIYNTIKQVFKYVMVYATHVPSFADTWGWVMASDQPLSIGAEEMDKRIEARIDGELLYLNGAWFQSSATMNKTVSQSLQNETHVYTEENARFIPGHGVAYRI* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g1057 346 Gene3D Vaccinia Virus protein VP39 94 345 IPR029063 -
Aev07g1057 346 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 42 322 IPR029063 -
Aev07g1057 346 MobiDBLite consensus disorder prediction 19 38 - -
Aev07g1057 346 Pfam Spermidine synthase tetramerisation domain 43 94 IPR035246 -
Aev07g1057 346 CDD AdoMet_MTases 122 230 - -
Aev07g1057 346 Pfam Spermine/spermidine synthase domain 97 275 - -
Aev07g1057 346 Gene3D Spermidine synthase, tetramerisation domain 41 93 IPR037163 -
Aev07g1057 346 ProSiteProfiles Polyamine biosynthesis (PABS) domain profile. 41 278 IPR030374 -
Aev07g1057 346 PANTHER THERMOSPERMINE SYNTHASE ACAULIS5 1 345 - -
Aev07g1057 346 PANTHER BNAA02G04280D PROTEIN 1 345 - -
Aev07g1057 346 Coils Coil 167 187 - -
Aev07g1057 346 Hamap Polyamine aminopropyltransferase [speE]. 42 323 IPR001045 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g1057 Aev-Chr7 8009890 8016256 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g1057 K18787 - gmx:100784972 604.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev07g1057 07 8009890 8016256 Aev07g1057 07 8009890 8016256 ECH