Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g1008 ATGGCTTGGAGGCCTTTCTTAACGCAGGTTGCAAGACGTCAACCAGAGCTTGGAATAGCAAAAAATCTGTTTGTTAGAGGCAATTTTTCTGTTAATAAGTTTGGAGATCGCACAGGGAATAGGCTTTTGTGCTTCCAAGAGAGATTCCAGTCCAGCTATGCTGCAAATTTTTCCCGTCAAGTACGCGATGCAGATGAAACCATTGAAATTTCTCGTCTTAAAGAACTTTACCATCGGAATGATCCTGAAGCTGTAATTAGGGTATTTGAAAGCCAGCCATCTCTGCATACTAATCCTTCAGCACTTTCTGAATATGTTAAAGCATTAGTGAAAGTTGATAGGCTGGATGAAAGTGAATTACTGAAGACATTGAAAAGAGGTATTTCAAGTTCAGCGAGGGAGGAAGAAAGTATAGGTGGCTTTTCTGCTTTTAGAAATGTCGGAAAATCTTCAGCAACCAAAGCTCTTGGAACTGCAAGTTCTCCAATTTATATGGTGACTACAGAAGCTTCAAATTTTAAAGATCGGCTGTGGCGTACATTTAGGTCCCTTATAGTGGTCTTTCTCTTGGTTTCTGGTGCAGGAGCACTCCTTGAGGATAAAGGAGTTAGTCAAGGACTTGGTGTAAATGAAGGAGTGCAACCAATCATGGACTCAAATACAAAACTTAACGATGTAAAAGGTGTTGATGAAGCAAAGGCAGAGCTTGAAGAAATTGTTCACTATCTTCGAGATCCTAAGCGCTTTACTCGTCTTGGTGGTAAGCTTCCAAAAGGAGTGTTGCTTTATGGTCCACCTGGCACTGGAAAAACCATGTTGGCAAGAGCTATAGCTGGAGAGGCTGGGGTTCCTTTCTTCTCTTGCAATGGAAGTGAGTTTGAAGAGATGTATGTTGGTGTTGGTGCTCGAAGGGTGAGGGATCTTTTTTCTGCTGCAAAGAAGCTATCACCATCTATAATCTTCATTGATGAGATAGATGCTATTGGAGGAAGCCGAAATCCAAAGGACCAAATGTACATGAAGATGACATTAAATCAATTGTTGGTTGAGCTAGATGGATTCAAACAAAATGAAGGCATAATTGTGATTGCAGCTACTAATTTTCCACAGTCATTGGATAAGGCTTTGGTGAGACCTGGTCGGTTTGATCGCCATGTTGTTGTTCCCAATCCAGATGTAGAGGGTAGACGGCAGATTTTGGAATCATACATGTCAAAGGTGATGAAGGCTGATGATGTTGATTTAATGATTATTGCTCGAGGAACCCCTGGGTTTTCAGGTGCTGACCTTTCGAACTTGGTTAACGTAGCTGCTCTCAAGGCTGCAATTAATGGTGCTAAGGCTGTGAGCATGGCTGATTTAGAGTATGCAAAGGACAAGATTATGATGGGAAGTGAGCGTAAATCAGCCGTCATATCCGAGGAGAATCGAAAGTTGACCGCTTTCCATGAGGGTGGTCATGCCATTGTGGCCATTCATACTGATGGGGCTCTTCCTGTCCACAAGGCAACAATTGTTCCTCGAGGGATGGCTCTCGGCATGGTTACCCAATTACCTGACAAGGATCAGACCAGCATCTCACGGAAACAGATGCTTGCCCGGCTCGATGTTTGCATGGGAGGCCGGGTTGCCGAAGAGCTAATTTTCGGAGAAAATGAAGTTACTTCTGGTCCATCTTCAGATCTCCAGCAGGCGACTAGTCTCGCAAGGGAAATGGTTACTAAATATGGTATGGGAAATGAAACTGGACTCGCCACTCACGACTACAACGATGATGGGAGAAGCATGAGCTCAGAGACTAGGCTTCTTATAGAGAAAGAGGTGAAGAACTTGCTGGAGAGGGCTTATAACAATGCAAAAACTATTCTAACCACCCACATGAAGGAGCTTCATGCACTTGCAAATGCTCTTTTGGAGCATGAGACCCTTACAGGAACTCAGATTAAGGCTTTGCTTGCTCAAGTTAAATCACAGAAGCAGCCGCATGTAGTCGAAGCGCAGAGCAGTTCGCAATCCAAAACGGCACCTCCATCATCCAATCCAGCGGCATCTGCTGCCGCAGCCGCGGCGGCTGCGGCAGCTGCAGCTACTGCTGCTGCCAAGGCCAAGGGTCAAGAAACTCAGAAGCGGAGAATTACTATAAGAAATTCCAATGGGGAAAGTCTTGTTGGGATCTTACACGATGCGGCTTCCACAGAACTCATCATCGTCTGTCATGGCTTCCAATCTTCCAAGGAAAGGATTCCGATGGTGAACCTTGCTGCTGCTATGGAAAAGGATGGAATCAGTGCCTTTCGATTTGACTTTGCTGGAAATGGGGAAAGTGAAGGTTCATTTCAATATGGTAACTACTACAGAGAAGTTGAAGACTTGCGAGCTGTCGTTCAACACTTCCGTGAGAAGGAATATGTAATTAAGGCAATTGTTGGTCATAGTAAAGGTGGTAATGTGGCACTCTTGTATGCTTCAAAGTATAAGGATGTTAATGTTATTGTCAATATTTCTGGCCGGTTTAATCTATTGAAAGGTATGGATGGTCGTTTGGGAAAAGATTTCATACGAAGGATCAAACGAGATGGATTCATTGATGTTAAAAATAGACGAGGGGATATTATGTATCGTGTTACTGAAGAAAGTTTGATGGATCGCTTATCTACTATTACCCATCTTGCCTGCCTATCAATTCCCCAAGACTGTAGAGTGCTGACACTCCATGGATCCTCGGATGAAACTGTACCTGCCGAAGATGCTTTTGAGTTTGACAAGTTCATATCTAATCATGAATTTTGCATCGTAGAAGGAGCAGATCATGAATTTACATCTCATCAAGATGAGTTGACCGGCTTAGTTTTGGCATTCATCGAGGATCATCACGATAAAGTCAAAGATACATCAAGACAGTTTGGAAGTGTCGATAAACCTTTTCGTTCGCGAATCTAA 2940 0.4344 MAWRPFLTQVARRQPELGIAKNLFVRGNFSVNKFGDRTGNRLLCFQERFQSSYAANFSRQVRDADETIEISRLKELYHRNDPEAVIRVFESQPSLHTNPSALSEYVKALVKVDRLDESELLKTLKRGISSSAREEESIGGFSAFRNVGKSSATKALGTASSPIYMVTTEASNFKDRLWRTFRSLIVVFLLVSGAGALLEDKGVSQGLGVNEGVQPIMDSNTKLNDVKGVDEAKAELEEIVHYLRDPKRFTRLGGKLPKGVLLYGPPGTGKTMLARAIAGEAGVPFFSCNGSEFEEMYVGVGARRVRDLFSAAKKLSPSIIFIDEIDAIGGSRNPKDQMYMKMTLNQLLVELDGFKQNEGIIVIAATNFPQSLDKALVRPGRFDRHVVVPNPDVEGRRQILESYMSKVMKADDVDLMIIARGTPGFSGADLSNLVNVAALKAAINGAKAVSMADLEYAKDKIMMGSERKSAVISEENRKLTAFHEGGHAIVAIHTDGALPVHKATIVPRGMALGMVTQLPDKDQTSISRKQMLARLDVCMGGRVAEELIFGENEVTSGPSSDLQQATSLAREMVTKYGMGNETGLATHDYNDDGRSMSSETRLLIEKEVKNLLERAYNNAKTILTTHMKELHALANALLEHETLTGTQIKALLAQVKSQKQPHVVEAQSSSQSKTAPPSSNPAASAAAAAAAAAAAATAAAKAKGQETQKRRITIRNSNGESLVGILHDAASTELIIVCHGFQSSKERIPMVNLAAAMEKDGISAFRFDFAGNGESEGSFQYGNYYREVEDLRAVVQHFREKEYVIKAIVGHSKGGNVALLYASKYKDVNVIVNISGRFNLLKGMDGRLGKDFIRRIKRDGFIDVKNRRGDIMYRVTEESLMDRLSTITHLACLSIPQDCRVLTLHGSSDETVPAEDAFEFDKFISNHEFCIVEGADHEFTSHQDELTGLVLAFIEDHHDKVKDTSRQFGSVDKPFRSRI* 980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g1008 979 SUPERFAMILY FtsH protease domain-like 471 657 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Aev07g1008 979 PANTHER METALLOPROTEASE M41 FTSH 10 684 - -
Aev07g1008 979 SUPERFAMILY alpha/beta-Hydrolases 707 957 IPR029058 -
Aev07g1008 979 CDD AAA 257 389 - -
Aev07g1008 979 Gene3D Peptidase M41 465 663 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Aev07g1008 979 Gene3D alpha/beta hydrolase 704 976 IPR029058 -
Aev07g1008 979 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 220 484 IPR027417 -
Aev07g1008 979 SMART AAA_5 256 392 IPR003593 -
Aev07g1008 979 Hamap ATP-dependent zinc metalloprotease FtsH [ftsH]. 4 673 IPR005936 GO:0004176|GO:0004222|GO:0016020
Aev07g1008 979 MobiDBLite consensus disorder prediction 662 681 - -
Aev07g1008 979 Pfam AAA+ lid domain 412 455 IPR041569 -
Aev07g1008 979 Pfam ATPase family associated with various cellular activities (AAA) 260 389 IPR003959 GO:0005524|GO:0016887
Aev07g1008 979 ProSitePatterns AAA-protein family signature. 360 378 IPR003960 GO:0005524|GO:0016887
Aev07g1008 979 Pfam Serine aminopeptidase, S33 733 838 IPR022742 -
Aev07g1008 979 Gene3D - 210 390 IPR027417 -
Aev07g1008 979 PANTHER ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 4, MITOCHONDRIAL-LIKE 10 684 - -
Aev07g1008 979 Gene3D - 391 464 - -
Aev07g1008 979 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 676 695 - -
Aev07g1008 979 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 264 283 - -
Aev07g1008 979 MobiDBLite consensus disorder prediction 662 683 - -
Aev07g1008 979 TIGRFAM FtsH_fam: ATP-dependent metallopeptidase HflB 218 652 IPR005936 GO:0004176|GO:0004222|GO:0016020
Aev07g1008 979 Pfam Peptidase family M41 471 650 IPR000642 GO:0004176|GO:0004222|GO:0005524|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g1008 Aev-Chr7 7462290 7471945 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g1008 65 652 Miscellaneous Gene Families AT5G53170 51.378 0.0 561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g1008 K08955 - jre:109020493 1067.37