Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g0973 ATGGCCGAAGAACCTCAATACTCATCCGAAACCACCACAACACCTCCTTCATTGAAGCGCAAGTACGACGACCAACAACAACCGCCGCGCCAAACCGGCTTCTCGTCCTCCCCCGGCGACGCGCATCCGCCGTCGTACAACAGCGTCCCTCCGCCGGCACCTTCCGGCATCGAGCTCGCCAAGCAGCGCGCTCAGGAGGTCGCCGCTCGCCTCCTCAGCGGCGCACCTCCTCCTCTCGACGCCAAGCGCTCCAAGTTCGATAACGGCGCACCAGCTCCTCCCTCCAATTTTGACTCCATCGATGTGAAGCCTCAGTACTCTGTGCCTACGATGTCTCCATCTGTGGTTTCTTACGGGCACCAGGGTGCAAGTAAGAAGATTGATATCCCTAATGGAAGAGTTGGTGTTATTATTGGCAAGGGTGGTGAGACTATCAAGTACCTTCAGCTGCAATCTGGGGCAAAAATTCAGGTCACTCGTGACATGGATGCTGACCCGAATTTGTCCACTCGGACGGTTGAGCTTATGGGTAATCCTGATGCAATTGCTGCTGCTGAAAAGCTCATCAATGAAGTTCTTGCTGAGGCTGAGGCAGGAGGTTCAGGCATTGCGGCCAGACGACTGACTGGACAAGCTGGGTCTGATGAGTTTGTGATGAAGATCCCAAATAACAAGGTTGGTCTTATTATTGGTAAAGGAGGAGAAACAATAAAGAATATGCAAGCTTCGACTGGTGCAAGAATTCAGGTGATTCCTCTTCATCTTCCCCCTGGTGACACGTCACCAGAAAGGACATTAAAAATTGAAGGGACCCCTGAGCAAATTGAGTCTGCAAAAGAAGTGGTTAATCAAGTCATCAGTGGCGAGAACCGTCTTAGAAATTCGGCAATGTCTGGTGGTTATCATCAGCAAGGTTACCAAGCCCGGCCACAATCTAACTGGGCGCCTCCTCAACAACCTGGTTATGGCTACGTGCAGCCCGGAGCATACCCTGGTCCGTCACCCCAGTATTCTCAGCCACCATATTCAGGCTATCCTCCTCCGTCATCTGGTGGATATTCCACCGGTTGGGACCAGTCCACTGCACCACCTCCCCAGCAGTCTAGTCACGGTGCTGGGTATGATTATTATGGTCAACAGCAGAACCCTGGGGGTGCACCTTCTGCTGATGGGAGTGGTTACAGTTACAGTCAACCACCTTCCTCCGGTTATAACCAACCGGGACAGGGCTATGGTCAGGATGGCTATGGTGGTTATCATGCAGCACCTCAATCAGGGTATGGACAGCCACCATCATATGATCAGCATCAAGGTTATAGCTCTGCCACTAACTATGCCAGTGGAAGCAACCCAGCACAAGAGGGCCACACTTCTAATTATGGAGTGCAGGGCGAATCAACCCAAGTTCCTCCTGCCCAACCTAATGCCACTAACTATCCTCCACAAGGTACCGGTCAGACCGGTTACGGGGTGCCCCCAACCTCCCAAGCAGCCTATGGTCAGACTGGTTATGGACCTAGTTACGGACCCTCTCAATCTCAAAAGCCTAGTGGCACTCCACCTGTTTATGGACAGTCACAGTCACCTAATATAACAGCAGGTTATGGTCAATCAGGGTATCCCCCAGCCCAGCCCCCACCTTCTGGATATACCCAACAAGAACCCGGCTCCCAGAGGGCTCCACCATCTGGTTACGGCGGCACAGCACAACCAGGGTACGGTCCTCCATCGTACGGTGCTCCGGGCAGTCAACCTGGGTATGGTCAGGCTCCACCATCATACACAAACAGTTCATACGGCGCTGGTTACTCTCAGCCTCCAGCATATTCTGGTGATGGTAATTCTGGGGCGACTACTCGCGGAAGCTATGATGGAGCACCTGCACAGACTGCTCAGCAGGGTAGTGTTCCCAAATCGTCACCCCAGAGTTGA 1932 0.5311 MAEEPQYSSETTTTPPSLKRKYDDQQQPPRQTGFSSSPGDAHPPSYNSVPPPAPSGIELAKQRAQEVAARLLSGAPPPLDAKRSKFDNGAPAPPSNFDSIDVKPQYSVPTMSPSVVSYGHQGASKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNLSTRTVELMGNPDAIAAAEKLINEVLAEAEAGGSGIAARRLTGQAGSDEFVMKIPNNKVGLIIGKGGETIKNMQASTGARIQVIPLHLPPGDTSPERTLKIEGTPEQIESAKEVVNQVISGENRLRNSAMSGGYHQQGYQARPQSNWAPPQQPGYGYVQPGAYPGPSPQYSQPPYSGYPPPSSGGYSTGWDQSTAPPPQQSSHGAGYDYYGQQQNPGGAPSADGSGYSYSQPPSSGYNQPGQGYGQDGYGGYHAAPQSGYGQPPSYDQHQGYSSATNYASGSNPAQEGHTSNYGVQGESTQVPPAQPNATNYPPQGTGQTGYGVPPTSQAAYGQTGYGPSYGPSQSQKPSGTPPVYGQSQSPNITAGYGQSGYPPAQPPPSGYTQQEPGSQRAPPSGYGGTAQPGYGPPSYGAPGSQPGYGQAPPSYTNSSYGAGYSQPPAYSGDGNSGATTRGSYDGAPAQTAQQGSVPKSSPQS* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g0973 643 CDD KH-I 124 189 - -
Aev07g0973 643 Gene3D K Homology domain, type 1 116 210 IPR036612 GO:0003723
Aev07g0973 643 Gene3D K Homology domain, type 1 211 313 IPR036612 GO:0003723
Aev07g0973 643 MobiDBLite consensus disorder prediction 428 537 - -
Aev07g0973 643 MobiDBLite consensus disorder prediction 1 43 - -
Aev07g0973 643 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 217 289 IPR036612 GO:0003723
Aev07g0973 643 MobiDBLite consensus disorder prediction 295 319 - -
Aev07g0973 643 ProSiteProfiles Type-1 KH domain profile. 214 282 - -
Aev07g0973 643 MobiDBLite consensus disorder prediction 588 643 - -
Aev07g0973 643 MobiDBLite consensus disorder prediction 295 643 - -
Aev07g0973 643 CDD KH-I 216 282 - -
Aev07g0973 643 MobiDBLite consensus disorder prediction 1 105 - -
Aev07g0973 643 MobiDBLite consensus disorder prediction 348 409 - -
Aev07g0973 643 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 125 200 IPR036612 GO:0003723
Aev07g0973 643 PANTHER KH DOMAIN CONTAINING RNA BINDING PROTEIN 73 636 - -
Aev07g0973 643 SMART kh_6 121 194 IPR004087 GO:0003676
Aev07g0973 643 SMART kh_6 213 287 IPR004087 GO:0003676
Aev07g0973 643 MobiDBLite consensus disorder prediction 333 347 - -
Aev07g0973 643 Pfam KH domain 218 283 IPR004088 GO:0003723
Aev07g0973 643 Pfam KH domain 126 191 IPR004088 GO:0003723
Aev07g0973 643 ProSiteProfiles Type-1 KH domain profile. 122 189 - -
Aev07g0973 643 PANTHER K DOMAIN-CONTAINING PROTEIN-RELATED 73 636 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g0973 Aev-Chr7 7136682 7142812 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g0973 K13210 - gmx:100813135 842.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev07g0973 07 7136682 7142812 Aev07g0973 07 7136682 7142812 ECH