Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g0943 ATGGCGGATCCGTACGTCATCGTTTGGATTCTGTGCTCTGTTCTCAGCCTATTCGCGCTCTACAGATTGGCTTTTGCCGGAGGAAAGAGCCGCCGGCAAGCTTTGCCTGAGAATGAGGTCCGGCAATCGGAGAACGTGACTACCGCCGTCGGAGAACGCGGATCGGAGAACCGAAACACCGACACTGACGTCATCATCGTAGGAGCTGGTGTTGCTGGTTCCGCTCTGGCTCACACTCTCGGCAAGGATGGACGACGAGTACATGTGATTGAAAGAGATTTGAGTGAGCCTGACCGAATTGTTGGAGAGTTGCTACAACCTGGTGGCTATCTCAAACTAATTGAGCTAGGACTTGAAGATTGTGTGGAGGAAATTGATGCTCAGAGAGTGTTTGGTTATGCTCTTTTCAAAGATGGCAAAAATACACGCCTCTCTTATCCCTTGGAGAAGTTTCACTCAGATGTCTCTGGCAGAAGCTTCCACAATGGACGTTTCATTCAGAGGATGCGGGAGAAGGCTGCATCACTTTCCAATGTACAATTGGAGCAAGGAACAGTCATTTCCCTACTTGAAGACAAGGGGACAATTCAAGGAGTGCAATACAAGACTAAAGATGGCCAAGAATTGAAAGCATATGCTCCTCTTACCGTTGTTTGTGATGGCTGTTTCTCAAACTTGCGTCGTTCTCTTTGTAATCCTAAGGTGGATATTCCCTCTTGCTTTGTGGGCCTAGTTTTGGAGAATTGTGAACTTCCATATGCAAATCACGGCCATGTCATACTGGGAGATCCTTCTCCAGTTCTGTTCTATCCTATAAGCACTACTGAGGTTCGCTGTCTGGTTGATGTTCCTGGTCAGAAGGTTCCTTCTATTTCAAACGGTGAAATGGCTAAGTATTTGAAGACTGTGGTGGCTCCTCAGGTTCCACCTGAGCTTTATGATGCCTTCATCGCTGCGGTGGACAAAGGCAACATAAGGACAATGCCGAACAGAAGCATGCCGGCCGATCCTCACCCTACTCCTGGAGCTCTTCTCATGGGAGATGCATTCAACATGAGGCATCCTCTAACAGGTGGTGGCATGACTGTGGCATTGTCTGATATTGTCGTGCTGAGAAATCTTCTCAGGCCTTTGCATGACCTCAATGATGCACCCACACTCTGCAAATACCTTGAATCCTTTTACACCTTGCGCAAGCCTGTGGCATCGACCATAAATACATTAGCAGGAGCACTGTACAAGGTATTTTGTGCATCCCCTGATCAGGCAAGGAAGGAAATGCGCCAAGCATGCTTCGATTATCTGAGCCTAGGAGGCCTATTCTCACAGGGACCAGTCTCTCTACTCTCAGGACTAAACCCTCGACCTCTGAGTTTGGTTCTTCATTTCTTTGCTGTTGCTATATTTGGTGTTGGCCGTTTAATATTTCCCTTCCCTTCACCTAATAGGCTATGGATTGGAGCTCGATTAATCTCTAGTGCATCTGGAATCATCTTGCCAATAATCAAGGCAGAAGGTGTTCGTCAAATGTTTTTCCCTGCAACTGTTCCAGCTTATTACAGAGCTCCCCCAGCAGCACGATAA 1584 0.4747 MADPYVIVWILCSVLSLFALYRLAFAGGKSRRQALPENEVRQSENVTTAVGERGSENRNTDTDVIIVGAGVAGSALAHTLGKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLIELGLEDCVEEIDAQRVFGYALFKDGKNTRLSYPLEKFHSDVSGRSFHNGRFIQRMREKAASLSNVQLEQGTVISLLEDKGTIQGVQYKTKDGQELKAYAPLTVVCDGCFSNLRRSLCNPKVDIPSCFVGLVLENCELPYANHGHVILGDPSPVLFYPISTTEVRCLVDVPGQKVPSISNGEMAKYLKTVVAPQVPPELYDAFIAAVDKGNIRTMPNRSMPADPHPTPGALLMGDAFNMRHPLTGGGMTVALSDIVVLRNLLRPLHDLNDAPTLCKYLESFYTLRKPVASTINTLAGALYKVFCASPDQARKEMRQACFDYLSLGGLFSQGPVSLLSGLNPRPLSLVLHFFAVAIFGVGRLIFPFPSPNRLWIGARLISSASGIILPIIKAEGVRQMFFPATVPAYYRAPPAAR* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g0943 527 Pfam Squalene epoxidase 213 485 IPR013698 GO:0004506|GO:0016021|GO:0050660
Aev07g0943 527 MobiDBLite consensus disorder prediction 36 57 - -
Aev07g0943 527 Gene3D - 54 437 IPR036188 -
Aev07g0943 527 Pfam NAD(P)-binding Rossmann-like domain 66 92 - -
Aev07g0943 527 PANTHER SQUALENE MONOOXYGENASE-RELATED 1 526 - -
Aev07g0943 527 PANTHER SQUALENE MONOOXYGENASE 1 526 IPR040125 GO:0004506|GO:0016126
Aev07g0943 527 SUPERFAMILY FAD/NAD(P)-binding domain 61 437 IPR036188 -
Aev07g0943 527 MobiDBLite consensus disorder prediction 39 55 - -
Aev07g0943 527 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 355 371 - -
Aev07g0943 527 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 212 227 - -
Aev07g0943 527 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 63 85 - -
Aev07g0943 527 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 340 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g0943 Aev-Chr7 6801570 6807220 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g0943 29 524 Miscellaneous Gene Families AT1G58440 78.514 0.0 817
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g0943 K00511 - gmx:100804406 931.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev07g0943 07 6801570 6807220 Aev07g0943 07 6801570 6807220 ECH
Aev07g0943 07 6801570 6807220 Aev08g0435 08 2416202 2420172 PCT