Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g0293 ATGGCTAACACCAACAGCAACACATACAAGCCAAAGAACATTCTCATTACTGGTGCTGCTGGATTCATTGCATCACATGTATGCAATAGACTAATCAGAAACCACTCAGATTACAAGATAATTGTTCTTGACAAGCTTGATTACTGCTCAAATCTGAAGAACCTTATCCCTTCTCATTCATCTCCAAACTTCAAGTTCATCAAGGGAGATATATGCAGTGCTGACATTGTTAACTACATCCTCCTCACAGAATCAATTGATACCATTATGCACTTTGCAGCTCAGACTCATGTTGATAACTCCTTTGGAAACAGCTTCGAGTTCACTCAGAACAACATCTATGGAACACATGTTCTTCTAGAAGCATGCAAAGTGAGTGGTGGACAAATAAAGAGGTTCATTCATGTTAGCACTGATGAAGTTTATGGTGAGACTGATGAGGATGCTGTGGTTGGAAACCATGAGGCTTGCCAATTGCTTCCAACTAATCCTTATTCTGCTACGAAAGCCGGTGCCGAAATGCTTGTCATGGCTTATGGAAGATCCTATGGACTGCCTGTTATTACCACAAGAGGGAACAATGTTTATGGTCCTAATCAGTTCCCTGAGAAGCTGATTCCAAAGTTTCTGCTATTGGCAATGAAAGGTAATGCTCTGCCAATTCATGGTGATGGATCAAATGTTAGGAGTTATCTCTATTGTGAAGATGTTGCTGAGGCTTTTGAGGTCATTCTCCACAGAGGTGAGGTAGGACATGTTTACAACATCGGGACGAAAAAGGAGAGGAGAGTGATTGATGTGGCCAGGGATATTTGCAGCCTTTTCAATTTGGATCCAGAGGCACAAATCAAGTTTGTTGAGAATAGGCCTTTCAATGATCAGAGATACTACTTGGATGATCAGAAGTTGAAGAGTTTGGGGTGGTTTGAGAGGACTACTTGGGAGGAAGGTCTCAGAAAAACCATGGATTGGTATGTCAAGAACCCTGATTGGTGGGGTGATGTTTCTGGAGCTTTGATTCCTCATCCAAGAATGTTGACTATGCCAGGAGTTGAGAAAAACAATGGTCAACAAGATATGAGCAAGGTCAATGCTTCTCCTTCTGTTGTGATGAACAATTCTAATCAGAACAGAATGGTTGTTCCAACTCCAAGGAACAATCTTATTAGTCCTCAGAAGCCATCATTGAAGTTCTTGATCTATGGTGGTGGAGGTTGGATTGGTGGACTAATTGGGAACATTTGTCAGAATCAAGGGATACCATTTGAGTTTGGAAGAGGGAATTTGGATGATAGGTCACAGATCTTGGCTGATATTCATAACATTAAACCAACACATGTTTTCAATGCTTCTGGTGTCACTGGTTCATTGAACCTGAAATGGTTTGAGGCTCATAAGATTGAGACTATCAGAGTCATTTTTGTTGGTGTCTTAACATTGGCTGATGTATGCAAGGAACATGGTCTTCCAATGACGAACTATGCATTTGGTGGAAATTTTGAAGACAGAACAAATTCAACTGATGATTCTTTCTACTCCAAAACACAAGCCAAGGTTGAAGAGCTTCTAAAGGACTATGATAATGTGTGCACCCTCAAAATTCAGTTTCCAGTATCTTCAGATCTAAGCAATCCACACAACTTTATCACTAAGATGACAAGATCTGATAAAGTGGCTAATATTCCTGCTAGCATAACTGTTTTGGATGAAATTTTGCCAATTTCAATTGAGATGGCTCAGAGAAATTGGTGCAAGGGTGTTTGGAACCTAACAAATCCTGGTACTGTGACCTGCAATGAGGTTCTTGAGATGTACAAGGATTTCATTGACCCTGATCTGAAATGGATCAATTTCACACCAAAGCAAGAGGCTCAATTCCCTGCTTTTGAGATCATCAATGAAATGGATGCTTCCAAATTGAAGAAGGAATTTCCTGAGCTGCTATCTGTCAAGGATTCATTGATTAAGTTTGTGTTTGAGCCAAAAAAGAAGAGTTTTGTGAATTGA 2007 0.4021 MANTNSNTYKPKNILITGAAGFIASHVCNRLIRNHSDYKIIVLDKLDYCSNLKNLIPSHSSPNFKFIKGDICSADIVNYILLTESIDTIMHFAAQTHVDNSFGNSFEFTQNNIYGTHVLLEACKVSGGQIKRFIHVSTDEVYGETDEDAVVGNHEACQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFLLLAMKGNALPIHGDGSNVRSYLYCEDVAEAFEVILHRGEVGHVYNIGTKKERRVIDVARDICSLFNLDPEAQIKFVENRPFNDQRYYLDDQKLKSLGWFERTTWEEGLRKTMDWYVKNPDWWGDVSGALIPHPRMLTMPGVEKNNGQQDMSKVNASPSVVMNNSNQNRMVVPTPRNNLISPQKPSLKFLIYGGGGWIGGLIGNICQNQGIPFEFGRGNLDDRSQILADIHNIKPTHVFNASGVTGSLNLKWFEAHKIETIRVIFVGVLTLADVCKEHGLPMTNYAFGGNFEDRTNSTDDSFYSKTQAKVEELLKDYDNVCTLKIQFPVSSDLSNPHNFITKMTRSDKVANIPASITVLDEILPISIEMAQRNWCKGVWNLTNPGTVTCNEVLEMYKDFIDPDLKWINFTPKQEAQFPAFEIINEMDASKLKKEFPELLSVKDSLIKFVFEPKKKSFVN* 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g0293 668 Pfam GDP-mannose 4,6 dehydratase 15 321 IPR016040 -
Aev07g0293 668 Gene3D - 206 328 - -
Aev07g0293 668 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 338 IPR036291 -
Aev07g0293 668 PANTHER DTDP-D-GLUCOSE 4,6-DEHYDRATASE-RELATED 6 664 - -
Aev07g0293 668 Gene3D - 389 668 - -
Aev07g0293 668 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 396 643 IPR036291 -
Aev07g0293 668 CDD dTDP_GD_SDR_e 12 330 IPR005888 GO:0008460|GO:0009225
Aev07g0293 668 Gene3D - 14 319 - -
Aev07g0293 668 PANTHER TRIFUNCTIONAL UDP-GLUCOSE 4,6-DEHYDRATASE/UDP-4-KETO-6-DEOXY-D-GLUCOSE 3,5-EPIMERASE/UDP-4-KETO-L-RHAMNOSE-REDUCTASE RHM1-LIKE 6 664 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g0293 Aev-Chr7 1681346 1683433 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g0293 7 326 Miscellaneous Gene Families AT4G00110 25.588 8.45e-18 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g0293 K12450 - gmx:100810341 1112.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev07g0293 07 1681346 1683433 Aev07g0293 07 1681346 1683433 ECH