Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g0132 ATGGCGCGAGTGTTGTACCTTGTTCTGCCTTTCCCTTCGCCAGAACCCCACAAAATCTCAGCTTCTTCTTCTTCTTCTTCATCTTGTCACAAACCTTTGAAGAAGCTTTCCCATAGAACCCGCAGCTCCAAAATATCAATTCCCACCACCACCAAAGGTGGTACCAATCACTTGCTCAAAACCCAGAAGCTGAATTCAGAGGTTTCCCCTCATAGAGCTGTGTCAGCGGTGAGGTTGATGAGGATAGAGCTTGGTGGTGCTTTTGCTGACCTTCTCAATGAGAAAGGCAAAGGTTCGGGTGAGAATGAGATGGGATATGTTGAGAGAACGCTTGGCTTTCGAACCCGGGAATTGAATCATCATGATCTTAGATTGGTTACTGACATTGTTGGGGGCACAATTCGTTGGAGAAGATATCTTGATCACCTGATCAGTTCGCTATGTCACGATAAAGATATATCTGGCATGGAACCTCTTCTCTTACAGATTCTACGAATTGGCTTCTATGAGATTGTTAAATTAGATATGCCACCATATGCTGTTGTGGATGAGAATGTTAGACTTGCAAAAGTTTCTCTCAGACCTGGTGCTGGCAACATGGTCAATGGAATCCTTCGAAAGCTAGCTGCGCTTAAGGAAGATGGAACTCTTCCTTTTCCCAAAGTGGAGGGTGATGATCGTGCTCAAGCACGTGCTTTGGCAACTCTATACTCACATCCAGTTTGGATGGTAAGGAGATGGACGAAGTATCTTGGCCAGGAAGAAGCCATTAAATTGATGATATGGAACAATAGTGAACCCAGTTTCAGCTTAAGAGCAAACATTGCGAGAGGTCTTTCGAGAGATGAGCTTGTGACTCAACTTAATGCATTGAAGGTCCCATATGATCTTTCATTGCATTTGGATGAATTTGTTCGCATCAAAACTGGGTTGCAGACTGTCATTCATGCAGGACTACTCAGAAAAGGTTTATGTTCAGTTCAGGATGAAAGTGCAGGTCTGGTAGTTTCTATTGTGGATCCCCAACCAGGTGAAACAGTCGTTGATTGTTGTGCTGCTCCTGGTGGAAAGACCCTGTACATGGCCTCTCGTTTAGGTGGCCAAGGTATGGTATTTGCAGTTGATGTAAACCGTGGTAGGTTGAGGATTCTTAAAGAGACGGCAAAGTTGCATCAAGTAGATGGTGTCGTTACCACCATCTGTGCCGATCTTCGTACATTAACTGACAGTGAACCACTTAAGAGTAACAAAGTTTTGTTGGATGCTCCCTGCTCTGGGCTTGGTGTTCTTTCCAAGAGAGCAGATTTGCGTTGGAACAGGAAGCTCGAAGATATGGAACAACTGAAGAAACTACAGGATGAGCTCCTCGATGCTGCATCCAAATTGGTAAAACCTGGTGGAATATTAGTTTACAGTACATGCTCCATTGATCCTGAAGAGAATGATGAAAGGGTGGCTGCATTTCTTGAAAGACACCCTGATTTTCGCATTGATCCTGTGGACAGATTTGTTCCACCTGATTTCGTGACAGAAAGTGGTTTCTATTTTTCCAACCCAAGACCTCACAAGTACTGCAATGGTGGTTGGATGGTTCCATTGTAG 1602 0.4426 MARVLYLVLPFPSPEPHKISASSSSSSSCHKPLKKLSHRTRSSKISIPTTTKGGTNHLLKTQKLNSEVSPHRAVSAVRLMRIELGGAFADLLNEKGKGSGENEMGYVERTLGFRTRELNHHDLRLVTDIVGGTIRWRRYLDHLISSLCHDKDISGMEPLLLQILRIGFYEIVKLDMPPYAVVDENVRLAKVSLRPGAGNMVNGILRKLAALKEDGTLPFPKVEGDDRAQARALATLYSHPVWMVRRWTKYLGQEEAIKLMIWNNSEPSFSLRANIARGLSRDELVTQLNALKVPYDLSLHLDEFVRIKTGLQTVIHAGLLRKGLCSVQDESAGLVVSIVDPQPGETVVDCCAAPGGKTLYMASRLGGQGMVFAVDVNRGRLRILKETAKLHQVDGVVTTICADLRTLTDSEPLKSNKVLLDAPCSGLGVLSKRADLRWNRKLEDMEQLKKLQDELLDAASKLVKPGGILVYSTCSIDPEENDERVAAFLERHPDFRIDPVDRFVPPDFVTESGFYFSNPRPHKYCNGGWMVPL* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g0132 533 ProSiteProfiles SAM-dependent MTase RsmB/NOP-type domain profile. 259 533 IPR001678 GO:0008168
Aev07g0132 533 MobiDBLite consensus disorder prediction 17 31 - -
Aev07g0132 533 CDD AdoMet_MTases 346 472 - -
Aev07g0132 533 Pfam 16S rRNA methyltransferase RsmB/F 338 501 IPR001678 GO:0008168
Aev07g0132 533 Gene3D Sun protein; domain 3 226 332 - -
Aev07g0132 533 Gene3D - 89 217 IPR035926 -
Aev07g0132 533 TIGRFAM rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 114 499 IPR004573 GO:0006364|GO:0008649
Aev07g0132 533 SUPERFAMILY NusB-like 107 243 IPR035926 -
Aev07g0132 533 PRINTS Viridiplantae FMU-related RCMT signature 216 229 IPR023268 -
Aev07g0132 533 PRINTS Viridiplantae FMU-related RCMT signature 77 100 IPR023268 -
Aev07g0132 533 PRINTS Viridiplantae FMU-related RCMT signature 101 117 IPR023268 -
Aev07g0132 533 PRINTS Viridiplantae FMU-related RCMT signature 493 505 IPR023268 -
Aev07g0132 533 Pfam NusB family 106 209 IPR006027 GO:0003723|GO:0006355
Aev07g0132 533 MobiDBLite consensus disorder prediction 15 43 - -
Aev07g0132 533 Gene3D Vaccinia Virus protein VP39 333 524 IPR029063 -
Aev07g0132 533 PANTHER NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING 21 523 IPR023267 GO:0001510
Aev07g0132 533 PRINTS RNA (C5-cytosine) methyltransferase signature 466 482 IPR023267 GO:0001510
Aev07g0132 533 PRINTS RNA (C5-cytosine) methyltransferase signature 348 358 IPR023267 GO:0001510
Aev07g0132 533 PRINTS RNA (C5-cytosine) methyltransferase signature 319 333 IPR023267 GO:0001510
Aev07g0132 533 PRINTS RNA (C5-cytosine) methyltransferase signature 416 428 IPR023267 GO:0001510
Aev07g0132 533 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 231 505 IPR029063 -
Aev07g0132 533 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 29 - -
Aev07g0132 533 PANTHER NOL1/NOP2/SUN FAMILY PROTEIN / ANTITERMINATION NUSB DOMAIN-CONTAINING PROTEIN 21 523 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g0132 Aev-Chr7 769725 774661 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g0132 K03500 - gmx:100779327 885.945
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev07g0132 07 769725 774661 Aev07g0132 07 769725 774661 ECH