Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g0131 ATGTCGCAGGAGAAGGGTCGGCCGCTACCTAAGTTTGGCGAATGGGATGTGAATGATCCAGCTTCAGCTGAAAGCTACACTGTGATATTTAACAAAGCTAGGGATGAGAAAAAGACAGGCGGCAAACCTGAGTCACCTGGGAAGGCTGATCCTCATACCAAGCCTGCAGCATTAGATCCTCACAAAACTCAGAGTGTAAGATGTTCTTGA 210 0.4762 MSQEKGRPLPKFGEWDVNDPASAESYTVIFNKARDEKKTGGKPESPGKADPHTKPAALDPHKTQSVRCS* 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g0131 69 Pfam Cleavage site for pathogenic type III effector avirulence factor Avr 4 39 IPR008700 -
Aev07g0131 69 PANTHER RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN 1 64 IPR040387 -
Aev07g0131 69 MobiDBLite consensus disorder prediction 32 69 - -
Aev07g0131 69 MobiDBLite consensus disorder prediction 1 20 - -
Aev07g0131 69 MobiDBLite consensus disorder prediction 32 57 - -
Aev07g0131 69 PANTHER RIN4, PATHOGENIC TYPE III EFFECTOR AVIRULENCE FACTOR AVR CLEAVAGE SITE-RELATED 1 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g0131 Aev-Chr7 767495 768380 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g0131 - - itr:116019488 112.464
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev07g0131 07 767495 768380 Aev07g0131 07 767495 768380 ECH