Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g3838 ATGGCAACAATGAACCCCTTTGATTTGTTGGGCGATGACGCTGAGGACCCTTCCCAGCTTATCGCCACCGAACAGCTCAAAGCTGCTGCCGCCGCCGCTGCTACGGCCGTTCCAGCCAAGAAGGGCGCCGCCGCCGGCCGTGGTGGTCAGCCAGCGCAGCAGAACAAGGCTGCTCAGCTCCCCACCAAACCGCTTCCTCCTTCTCAGGCTGTGAGAGAGGCCAGAAATGAAACATCCCGTGGAGGCCGTGGAGGTGGAAGGGGTGGTGGACGTGGGTATGGGCGTGGTCGCGGTTTTAATCGTGACTTTTCCAATGATGAGAACTCATTCCCAGCCACTGGAGCCCCTGTTAATCAAGGTTCTTTTGAAGAGGGAGATGCTGAGAAGGGATCAGAAAGACGGGGTTACGGTGCACCGAGGGGTCCTTACCGTGGCGGTCGTCGTGGAGGCTTCAGCAATGGTGAAGCTGGTGAAGATGGACGCCCAAGAAGAGTATTTGAACGCCGTAGTGGGACTGGACGCGGAAATGAATTCAAACGTGAAGGTGCTGGTCGAGGAAATTGGGGAACACAAACAGATGAAATTGCTCAGGTGACTGATGAAGCCGTGAATGAAACTGAAAAGAATTTCGGTGATGAGAAGCCAGCTGTTGAAGATGATGTGGCAGATGGAAACAAGGATAGCCCTGCTGATGAAAATGAAGAAAAAGAGCCTGAGGACAAGGAGATGACTCTGGAGGAGTATCAGAAAGTTCTGGAAGAGAAAAGAAAGGCTCTGCAAGCACTCAAAACTGAAGAGAGAAAGGTAGACACCAAAGAGTTTGAATCCATGCAGCCCCTATCGAACAAGAAAGACAATGATGTTATCTTCGTTAAATTGGGCTCTGATAAGGACAAGCGCAAAGAGGCTTTTGAAAAGGAAGAGAAAGCCAAGAAGTCTGTCAGCATCAATGAGTTTCTGAAGCCAGCTGAAGGTGAAAGCTACTATGGAGGCCGTGGTCGGGGACGTGGACGTGGTTCAAGGGGTGGTTACCGTGGAAACTCTGGAAACAATGCTCCGGCCCCATCCATTGAAGATCCTGGGCATTTCCCAACATTGGGTGGCAAGTGA 1110 0.5189 MATMNPFDLLGDDAEDPSQLIATEQLKAAAAAAATAVPAKKGAAAGRGGQPAQQNKAAQLPTKPLPPSQAVREARNETSRGGRGGGRGGGRGYGRGRGFNRDFSNDENSFPATGAPVNQGSFEEGDAEKGSERRGYGAPRGPYRGGRRGGFSNGEAGEDGRPRRVFERRSGTGRGNEFKREGAGRGNWGTQTDEIAQVTDEAVNETEKNFGDEKPAVEDDVADGNKDSPADENEEKEPEDKEMTLEEYQKVLEEKRKALQALKTEERKVDTKEFESMQPLSNKKDNDVIFVKLGSDKDKRKEAFEKEEKAKKSVSINEFLKPAEGESYYGGRGRGRGRGSRGGYRGNSGNNAPAPSIEDPGHFPTLGGK* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g3838 369 Pfam Hyaluronan / mRNA binding family 162 269 IPR006861 -
Aev06g3838 369 PANTHER NUCLEAR RNA-BINDING-LIKE PROTEIN 1 369 - -
Aev06g3838 369 Coils Coil 245 272 - -
Aev06g3838 369 MobiDBLite consensus disorder prediction 190 204 - -
Aev06g3838 369 MobiDBLite consensus disorder prediction 289 315 - -
Aev06g3838 369 MobiDBLite consensus disorder prediction 157 181 - -
Aev06g3838 369 MobiDBLite consensus disorder prediction 265 369 - -
Aev06g3838 369 Pfam Stm1 1 85 IPR019084 -
Aev06g3838 369 PANTHER HYALURONIC ACID-BINDING PROTEIN 4 1 369 IPR039764 GO:0003723
Aev06g3838 369 Gene3D - 160 273 - -
Aev06g3838 369 SMART HABP4_PAI_RBP1_2 162 270 IPR006861 -
Aev06g3838 369 MobiDBLite consensus disorder prediction 265 280 - -
Aev06g3838 369 MobiDBLite consensus disorder prediction 205 232 - -
Aev06g3838 369 MobiDBLite consensus disorder prediction 28 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g3838 Aev-Chr6 38257898 38261004 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g3838 K13199 - gmx:100814825 468.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g3838 06 38257898 38261004 Aev06g3838 06 38257898 38261004 ECH
Aev09g0446 09 3907249 3911516 Aev06g3838 06 38257898 38261004 PCT