Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g3297 ATGTCGCAGTTGTTGGAGAAAGCGAAGAACTATGTGACGGAAAAGGTGACGAACATGCCGATGCCGGAGGCGAGTGTGAAGGACGTGGATTTCAAGCGCGTGAGCAGAGACTCCGTCGAGTATTTGGCCAAGGTTGATGTTTCCAACCCTTACTCCACTCCCATTCCTATCTGTGAGATCAAGTATTCCCTCAAGAGTGCTGGAAGGGAGATAGCATCAGGGACAATACCAGACCCAGGGTCATTGAAGGCAAGTGACACAACAGCTCTGGAAGTGCCAGTGAAGGTTCCACACAGCATATTGCTGAGCTTGGCAAGGGACATAGGCGCAGATTGGGACATTGATTACCAATTGGATCTTGGCCTCGTTATTGACCTCCCTGTTATTGGCAACTTCACCATTCCTCTCTCTCAGAAAGGCGAGATCAAGCTCCCTACCCTCACTGATCTCTTCTCTGGTGGTGCTAAAACTAACGAATAG 480 0.4958 MSQLLEKAKNYVTEKVTNMPMPEASVKDVDFKRVSRDSVEYLAKVDVSNPYSTPIPICEIKYSLKSAGREIASGTIPDPGSLKASDTTALEVPVKVPHSILLSLARDIGADWDIDYQLDLGLVIDLPVIGNFTIPLSQKGEIKLPTLTDLFSGGAKTNE* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g3297 159 Pfam Late embryogenesis abundant protein 44 140 IPR004864 -
Aev06g3297 159 SUPERFAMILY LEA14-like 2 150 - -
Aev06g3297 159 Gene3D - 17 151 - -
Aev06g3297 159 PANTHER - 1 158 IPR045043 -
Aev06g3297 159 SMART why 24 141 IPR013990 GO:0009269
Aev06g3297 159 PANTHER DESICCATION-RELATED PROTEIN LEA14-RELATED 1 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g3297 Aev-Chr6 34314999 34316350 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g3297 - - gmx:547837 281.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g3297 06 34314999 34316350 Aev02g0240 02 1752732 1753672 PCT