Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g3270 ATGTCAATTAGAACAGGAATAATAACATGTCAAAAAATCTTGGTGGTTTTATTGATTTTGGTATCATCAATGAATGTGTATTGTTTGGAATGTGAAGATGATCGATGCAAAACAGGGTTGTGTAACAGCACTGGTGCTTGCATTTGCAACTTTCCTGATCCTTCCACAATATTAGATGGTGATAGAACATTTCTGGGGGGTAAGTTGTGTGATGAAGAAATGACAATGTGTGATGGAACAAACTCATTCTGGTGTGAACATGGTGGAGCTTGTGAGGAGATTGTTCAAGGAGAAAAGTACTCATGTAAATGCTCCCTTGGATTTTCTGGGGAGCATTGTGAGCATTCTGGAGCACCATGTGGTCAAAATTTCTGTTTCCACAATGCAGATTGTATGGCTGAAGCAGGCTATGTTTGTCAGTGTCCACCAGATTGGAAAGGAAGTGATGATTGCTCTGTTCCATCAACAACTTCATCAGATTTTTACTCAAATTCATCTTCCACAGAATTGCCTAAAGCAACCAGAAATAGTGACAAAAATAAAACATTGGCTTTCTTGGCAATTTCTTCAGTTGGAGCAGTTGCTGCTGGTGCCATTTATGGCAAGAAAGTATTCAGCAAGAAAAAGAGAGATTCAGTTAAGTTTCAGCAGTTATCTGAAATGCATGCTCAAGGAGTACTAGATGATGATGATGAGAATCTGTCTATGGTGCCTGAGAGAGTTCATGTTCTTATTATTTTGGTGCTTTTTTCTTTCTCCTTTGGTGTGTTCTGCGGAAATGATGAACTTGGGAGTGATGAAACCTTTACTGTTTCAAGCTTCAGTTACCCTGAGACTAGGCTTAAGCCCTTTGATTTGCGATATATCAGAGTTGACTTGCCGCCGTGGTTCTCGGCAGTGTCGATAGCATTGAACTCAGATGTAGACCTTGATTTCTCAAGAATTGAAAGAGTTTCACAGAGCATGCTGCCAATAATATGCTTTAGAGATGGAAGTCCTCCACTTCCAGATGCCTTAAACATTTCCCTGAAGGATTCAGCCATTTCAGGGATGAATGGTCTTGATGTGGAGCAATGCTTTCCTATGCAGAAAAATATCACTATGAAACTGACAAACAATCAGATATCTCCAGGTGTTTGGTACATTGGTCTTTTCAATGGCATTGGACCTTTAAGGACACAATCAAAGATGATTATTCGGGGTCCAGCGTACTCCTTCATTGCTAATATAAGTGTGGAAGCATGCATAAATTCAATGATGACAGGGAATTTCTGTAACAATACAGTGTATCCACTTTCATGCACAGCATCTGATATTTATAATGCTTTGGGGACTACAAAGAATAAGCCAGAGTTGGCGAATGTGGCGACCTGCAAAAGTACTTTCGGAATGTTTTGTGCTCAAGAAAGTGTGCCAAACTTGTTCTCCTTGGATATTATGAATGTGGCAGAAGAACTCAGCATTACAGCAACAAATATCAGATTAAATAACACTTCTGCTGCAAAGGAAGTTAATTTAATGTGTTTTGTTCGCCATGCTGCAATGCCTTCAGCAACTTTATACGACTATGCTTGTGATTTAAGTAAAGTCCCTCTGGCTATTCATTCTCCGTTGATTGGTCGTTGGTACATCAGTATAGTACCAGTCAATCTTACAAAGACTCAGGATAGCAATTTACGAGTTTGCTATTCGGTGAAGTCGCATGTGCTTCAATGTCCACTTGGTAAAGGCGGACCGAATTGTACAATGAATAGCTACATGCTTCAGACATTTGTAAGGAGAGGTCCAACCCCATTTGAATCATATTATTTACCGGTTGGTGGTGGAGTCTCATATGATTCTGCGAATTTTGCTCTCGAGCCACTTTTAAACAACTCATTATACGACGGCGGCGACATTTGGACTTACTTTCTATTGGACATACCGCATGGTGCAGCCGGAGGAAACATCCACATACAGCTATCCTCAGATTTTAAGATCAGTTACCAAGTATATGCTAGATTTGGTGGATTGCCATCTCTTGATAGCTGGGATTATTATTATGTAAACAAGACAAGGAGAAGTGATCCATCCATGTTTTTCATGCTCTATGATTCAAGTGATGTCAAGGCAGATTTTTACATTATGTATGCTAGAGAAGGAACTTGGGGCCTCGGCCTACGGCATCTTAATACCAGCATTGATTCTTTAAAGGGGCTAACTATCATGTCACTTTCGCTTGAACGATGTCCAAAGCGATGTTCCTCTCATGGTGAATGTAAATTTTCTTTCGATGCGAGTGGATTGACATCATACAGCTTCTGCGCCTGCGATCGAAACCATGGAGGATTTGACTGTAGCATTGAAATTGTTACACACCAAGGGCATGTGCGTCAATCAATTTTTCTCATCGTGTCAAATGCTGCAGCCATATTTCCTGCCATTTGGGCCCTTCGGAAGAAGGCATTAGCAGAGTGGGTTTTGTTCACATCCAGTGGAATTTCGAGTGGACTATATCACGCATGCGATGTTGGTACCTGGTGTGCATTGAACTACAATGTCCTACAGTTCATGGACTTCTGGCTCTCCTTCATGGCTGTGATTAGCACTTTTCTTTATCTAGCTACCATTGATGAAGTATTCAAGAGAGCAATCCACACAGCCGTCGCTATCCTTACGGCCCTAATGGCTGCAACGAAAGCAACCAGGTCTTCCAATGTTGTTCTCGTGATTGTGATCGGCGCTCTAGGTCTTCTTATTGGATGGTTGATAGAGATCTCTACAAAGTATAGGTCCCTTTCCTTTTCAATTAGATTCTCACTAAATTTCCCTCACAGTTTGCAAACTATAAAGCGATGGCTCGTCGATCTTGTCAAGACACTTCTGCGACGGTACCACTTGGCTTTCGCTTTGGCTGGTTTTGCAGCATTGGCCATGGCAGCAATAAGCTGGACTCTTGAAACCAGTGAAACCTACTGGTTTTGGCATAGCTTTTGGCATATTACAATATACACATCTTCTTTCTTCTTCCTTTGTTCAAAAGCAAATATTGTGGATAGTGAGAATCATCTACCAACAAATGGAAACTATGAATTGACTCATCAAGATTCACTTCCAAGAGGTGGTTAG 3108 0.4099 MSIRTGIITCQKILVVLLILVSSMNVYCLECEDDRCKTGLCNSTGACICNFPDPSTILDGDRTFLGGKLCDEEMTMCDGTNSFWCEHGGACEEIVQGEKYSCKCSLGFSGEHCEHSGAPCGQNFCFHNADCMAEAGYVCQCPPDWKGSDDCSVPSTTSSDFYSNSSSTELPKATRNSDKNKTLAFLAISSVGAVAAGAIYGKKVFSKKKRDSVKFQQLSEMHAQGVLDDDDENLSMVPERVHVLIILVLFSFSFGVFCGNDELGSDETFTVSSFSYPETRLKPFDLRYIRVDLPPWFSAVSIALNSDVDLDFSRIERVSQSMLPIICFRDGSPPLPDALNISLKDSAISGMNGLDVEQCFPMQKNITMKLTNNQISPGVWYIGLFNGIGPLRTQSKMIIRGPAYSFIANISVEACINSMMTGNFCNNTVYPLSCTASDIYNALGTTKNKPELANVATCKSTFGMFCAQESVPNLFSLDIMNVAEELSITATNIRLNNTSAAKEVNLMCFVRHAAMPSATLYDYACDLSKVPLAIHSPLIGRWYISIVPVNLTKTQDSNLRVCYSVKSHVLQCPLGKGGPNCTMNSYMLQTFVRRGPTPFESYYLPVGGGVSYDSANFALEPLLNNSLYDGGDIWTYFLLDIPHGAAGGNIHIQLSSDFKISYQVYARFGGLPSLDSWDYYYVNKTRRSDPSMFFMLYDSSDVKADFYIMYAREGTWGLGLRHLNTSIDSLKGLTIMSLSLERCPKRCSSHGECKFSFDASGLTSYSFCACDRNHGGFDCSIEIVTHQGHVRQSIFLIVSNAAAIFPAIWALRKKALAEWVLFTSSGISSGLYHACDVGTWCALNYNVLQFMDFWLSFMAVISTFLYLATIDEVFKRAIHTAVAILTALMAATKATRSSNVVLVIVIGALGLLIGWLIEISTKYRSLSFSIRFSLNFPHSLQTIKRWLVDLVKTLLRRYHLAFALAGFAALAMAAISWTLETSETYWFWHSFWHITIYTSSFFFLCSKANIVDSENHLPTNGNYELTHQDSLPRGG* 1036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g3270 1035 PANTHER FIVE-SPAN TRANSMEMBRANE PROTEIN M83 244 1034 IPR021910 GO:0016021
Aev06g3270 1035 CDD EGF_CA 85 114 - -
Aev06g3270 1035 ProSitePatterns EGF-like domain signature 1. 102 113 IPR000742 -
Aev06g3270 1035 ProSiteProfiles EGF-like domain profile. 73 114 IPR000742 -
Aev06g3270 1035 SUPERFAMILY EGF/Laminin 74 115 - -
Aev06g3270 1035 CDD EGF 122 151 - -
Aev06g3270 1035 ProSitePatterns EGF-like domain signature 2. 102 113 IPR000742 -
Aev06g3270 1035 SMART egf_5 119 152 IPR000742 -
Aev06g3270 1035 SMART egf_5 76 114 IPR000742 -
Aev06g3270 1035 Pfam EGF-like domain 77 112 IPR000742 -
Aev06g3270 1035 MobiDBLite consensus disorder prediction 155 174 - -
Aev06g3270 1035 Gene3D Laminin 76 152 - -
Aev06g3270 1035 ProSiteProfiles EGF-like domain profile. 116 152 IPR000742 -
Aev06g3270 1035 ProSitePatterns EGF-like domain signature 1. 768 779 IPR000742 -
Aev06g3270 1035 PANTHER TRANSMEMBRANE PROTEIN-LIKE PROTEIN 244 1034 - -
Aev06g3270 1035 Pfam Protein of unknown function (DUF3522) 789 994 IPR021910 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g3270 Aev-Chr6 34039718 34050011 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g3270 - - gmx:100778959 1335.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g3270 06 34039718 34050011 Aev02g0275 02 1988708 2003146 PCT