Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g3103 ATGGGGAACTGTGTGGGTAAGTCTCAAACAAAGGATTCTGACTCTGATCATCATGTGGAGCTTGCTTCTGGAAATGTGAAACTTATTACAACCAAAGAAGCTTGGGATCAAAAGTTGGAAGAAGCAAGGAGGGATGGCAAAATTGTGATCGCGAATTTCAGTGCTACATGGTGTGGTCCTTGTAAAGTTATTGCGCCATATTACTCCGAGTTATCCGAGAAATACTCATCTCTAATGTTCTTATTAGTTGATGTGGATGAACTAACAGATTTCAGCACTTCATGGGACATAAAAGCCACACCAACTTTCTTCTTTCTTAAAGATGGGCAACAAGTTGACAAACTTGTGGGAGCCAACAAGCCAGAGCTGCAGAAGAAGATTGCCACCATAACTGATTCGGTTCCGGAATCTCGGTCATAA 420 0.419 MGNCVGKSQTKDSDSDHHVELASGNVKLITTKEAWDQKLEEARRDGKIVIANFSATWCGPCKVIAPYYSELSEKYSSLMFLLVDVDELTDFSTSWDIKATPTFFFLKDGQQVDKLVGANKPELQKKIATITDSVPESRS* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g3103 139 SUPERFAMILY Thioredoxin-like 20 131 IPR036249 -
Aev06g3103 139 PANTHER THIOREDOXIN 1 137 - -
Aev06g3103 139 Pfam Thioredoxin 29 128 IPR013766 -
Aev06g3103 139 ProSiteProfiles Thioredoxin domain profile. 8 132 IPR013766 -
Aev06g3103 139 PRINTS Thioredoxin family signature 96 107 - -
Aev06g3103 139 PRINTS Thioredoxin family signature 57 66 - -
Aev06g3103 139 PRINTS Thioredoxin family signature 49 57 - -
Aev06g3103 139 CDD TRX_family 33 128 - -
Aev06g3103 139 ProSitePatterns Thioredoxin family active site. 50 68 IPR017937 -
Aev06g3103 139 Gene3D Glutaredoxin 1 138 - -
Aev06g3103 139 PANTHER THIOREDOXIN 1 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g3103 Aev-Chr6 32574144 32576241 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g3103 K03671 - gmx:100813401 236.498
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g3103 06 32574144 32576241 Aev06g3103 06 32574144 32576241 ECH
Aev06g3103 06 32574144 32576241 Aev02g0020 02 100742 103460 PCT