Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g3098 ATGGAGAGATTTGGAGTAGCAATTGTTTCTTTCATTCTTCTTCTGATTCTTACTAAAAGTACCAATGCAGTAGTTGGTGGTACTATGAAGGAAGAGCAAAATCATATAGCAAATTCTTTCTCAAGTAATTATAGGATTGAAAGGGGGGAGATGATGGAAGAGGATGATCAATGGGAAATGGTGAAAAAGAAAGGGAAGCAATTTGTGGTGAATGATCAACCTTTCTATGTAAATGGATTCAACACTTACTGGCTGATGGTGTTTGCTGTGGATCAGTCCACAAGAGGGAAAGTCACTGAGGTGTTCCAACAAGCTTCCTCTGTGGGAATGACAGTTTGTAGGACTTGGGCCTTCAATGATGGCCAGTGGAGGGCCCTACAAAAATCTCCATCAGTTTATGATGAAGATGTCTTCAAGGCACTGGACTTTGTGATAAGTGAAGCAAAGAAATACAAAATAAGGGTGATATTATCATTGAGTAACAACTGGGAAGCATATGGAGGGAAAGCACAATATGTGAAATGGGGAAAAGATGCTGGTCTTGATGTCTCCATAGATGATGACTTCTTTACACATCCAACTCTTAGAAATTACTACAAGGCACATGTTAAGACTGTTCTCAATAGAGTTAATACATTCACAAATATCACTTACAAGGAAGATCCAACAATTTTTGCATGGGAATTGATGAATGAGCCTAGATGCACCTCTGATTCCTCTGGAGATAAACTACAGGATTGGATTCAAGAAATGGCATTCTATGTGAAGAAAATTGATCCAAAACACCTTGTAGAGGTTGGACTTGAAGGATTCTATGGACCCTCAACACCTCAGAGGACTCAGTTCAATCCAAACACATATGCTCAACAAGTTGGAACTGATTTTGTTAGGAATCATCTGGTTCTTGGTGTTGATTTTGCCTCTGTTCACATATATGCAGATTCTTGGATCTCAACACAAATCACTGATACACATCTGCAATTCATAACATCATGGATGCAATCCCACATAGAAGATGCAGAGAAGTACCTAGAAATGCCAGTTATTTTTGCAGAGTTTGGTGTATCTTCAAAAGACCCTGGCTACAACACAACATACAGAGACACCCTTATAAGCACAGTTTACAATGTGATCCTAAACTCTACAAAAAAAGGAGGGAGTGGTGCTGGAAGCCTCTTGTGGCAAGTGTTCCCTGAAGGAACAGAGAACATGGATGATGGCTATGCAATTGTGTTACCAAAGTCTCCTTCCACATCAACTCTTGTGTCTCATCATTCCAATAAGCTTGCATTGTTCAACTCAATGTGTTCTTCCAAATGCCAATGGAGTTGTAAGAAGAAGAAAGTGTTGGAGGACAATACACTCTCTCATGATGAATTCTGA 1383 0.3955 MERFGVAIVSFILLLILTKSTNAVVGGTMKEEQNHIANSFSSNYRIERGEMMEEDDQWEMVKKKGKQFVVNDQPFYVNGFNTYWLMVFAVDQSTRGKVTEVFQQASSVGMTVCRTWAFNDGQWRALQKSPSVYDEDVFKALDFVISEAKKYKIRVILSLSNNWEAYGGKAQYVKWGKDAGLDVSIDDDFFTHPTLRNYYKAHVKTVLNRVNTFTNITYKEDPTIFAWELMNEPRCTSDSSGDKLQDWIQEMAFYVKKIDPKHLVEVGLEGFYGPSTPQRTQFNPNTYAQQVGTDFVRNHLVLGVDFASVHIYADSWISTQITDTHLQFITSWMQSHIEDAEKYLEMPVIFAEFGVSSKDPGYNTTYRDTLISTVYNVILNSTKKGGSGAGSLLWQVFPEGTENMDDGYAIVLPKSPSTSTLVSHHSNKLALFNSMCSSKCQWSCKKKKVLEDNTLSHDEF* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g3098 460 Gene3D Glycosidases 58 432 - -
Aev06g3098 460 PANTHER - 8 459 IPR045053 GO:0004553
Aev06g3098 460 Pfam Cellulase (glycosyl hydrolase family 5) 72 374 IPR001547 GO:0004553|GO:0071704
Aev06g3098 460 PANTHER MANNAN ENDO-1,4-BETA-MANNOSIDASE 8 459 - -
Aev06g3098 460 SUPERFAMILY (Trans)glycosidases 60 418 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g3098 Aev-Chr6 32543779 32548104 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g3098 55 460 Glycoside Hydrolase AT5G01930 71.253 0.0 651
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g3098 K19355 - gmx:100811794 753.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g3098 06 32543779 32548104 Aev06g3098 06 32543779 32548104 ECH
Aev06g3098 06 32543779 32548104 Aev02g0022 02 110712 113340 PCT