Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g3011 ATGGCTTCCCAATTCATCAATATCTTCTTCTTCCTCCTCATTCTCCTCTTCTACACTAGTCCAATTTCATTTGTTACCTCATCACCACAAGAGTATGATGATGATGATGATTTTGTGCATCAATTAAATCACAATGAATTATTGGAGAATAAGAAATTAGAAAAGCTTAGCCATTTGAAGGTGTATTGGCATGACATAACAAGTGGAACAAAACCAACATCCATGGAAATTGTTCCACCAATCTTGAACTACTCATCAATCTCAGCCTTTGGATTGGTCAAAATGATTGACAATCCTTTGACTCTTGGACCCAAGTTGAGCTCCAAGCTTGTGGGAAGGGCTCAAGGATTCTATGCATCAACATCACAAAGTGAGGTTGATTTGCTCATGGCTATGAATTTTGCAATCACTGAAGGGAAGTACAATGGAAGCACAATCACTATATTAGGGAGGAACCCTGTTTTCAATAAGGTTAGGGAGATGCCTGTGATTGGTGGTAGTGGCTTGTTTCGGTTTGCTAGGGGTTATGCTCAACTTAGGACTCATTGGTTCTCACCAAAAACTCAGGCTGCTATAGTTGAGATGAGGAGGCAGCTGAAGTGGAGGGCAACACGGTTCAAGGGCGTTGATGCCGGTGCTGCCCAAGAAGACCGTGGTCTTGCTGATACTGGAATAGAGGGAGACTTGACAAATGACATTCTCTGCTTACCAAATCTTCAAGAGCTCTCTCTGGGAAGTAATGGGGGCATTCAAGTCCTTCATCTTCCAGCAGATCATCAGTTGAATTGCAACAGTTCCTCTCTCATTACTGTCTTGGATCTTCCAGAATGTTCATTCCAAGGGTCAATCCCATCGTCCTTTGCCAACCTCACACATCTCACTTCCTTGTTCTTGTCACAAAATAACCTTAATGGTCCTATCCCAAAATTCCACTGCTCCTGTCCACTTTCCACTGTTCTCCAAGTTTCAAAACTTGATGTTTCTTACCCTTTCAGTGGTCCATTGCCCGAAGACTACATAAAAAGTTTTCAAGCCATGAAACCAAGTATTGGCATTGAATACAAAAGAGGCTACATAACTGAATATGAGAATAGTTTGGTTGTAATATTTAAAGGGATCCGTGTAATTTATGTGAAAATCCCTGCAATGTTAGTAAATATTGATTTATCAGTAAATAAATTTGAAGGAGGGATTCCGAATGTTATTGGAAAGCTTGTTGAACTCAAAGGGCTAAACCTTTCCCATAATAGACTCACCGGTCCTATTCCTTGTTCCATGGGAAATTTGAAAAGCCTTGAATCATTGGACCTCTCCTCAAATAACCTTGCTGGCGGCATTCCTGTTGAGCTAACCAATTTGAACTTTCTTGAAGTCTTGAATCTTTCCTATAACCATCTTGTGGGGCCAATACCAAAAGGAAAACAGTTCAACACATTTTCAAATGAATCCTATGTGGATTTCCATTGA 1467 0.4056 MASQFINIFFFLLILLFYTSPISFVTSSPQEYDDDDDFVHQLNHNELLENKKLEKLSHLKVYWHDITSGTKPTSMEIVPPILNYSSISAFGLVKMIDNPLTLGPKLSSKLVGRAQGFYASTSQSEVDLLMAMNFAITEGKYNGSTITILGRNPVFNKVREMPVIGGSGLFRFARGYAQLRTHWFSPKTQAAIVEMRRQLKWRATRFKGVDAGAAQEDRGLADTGIEGDLTNDILCLPNLQELSLGSNGGIQVLHLPADHQLNCNSSSLITVLDLPECSFQGSIPSSFANLTHLTSLFLSQNNLNGPIPKFHCSCPLSTVLQVSKLDVSYPFSGPLPEDYIKSFQAMKPSIGIEYKRGYITEYENSLVVIFKGIRVIYVKIPAMLVNIDLSVNKFEGGIPNVIGKLVELKGLNLSHNRLTGPIPCSMGNLKSLESLDLSSNNLAGGIPVELTNLNFLEVLNLSYNHLVGPIPKGKQFNTFSNESYVDFH* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g3011 488 PANTHER DIRIGENT PROTEIN 10 195 - -
Aev06g3011 488 PANTHER NUCLEOPORIN-RELATED 10 195 IPR004265 -
Aev06g3011 488 Pfam Leucine rich repeat 384 442 IPR001611 GO:0005515
Aev06g3011 488 Pfam Dirigent-like protein 57 196 IPR004265 -
Aev06g3011 488 PRINTS Leucine-rich repeat signature 429 442 - -
Aev06g3011 488 PRINTS Leucine-rich repeat signature 408 421 - -
Aev06g3011 488 Gene3D Ribonuclease Inhibitor 219 486 IPR032675 -
Aev06g3011 488 Gene3D - 43 198 IPR044859 -
Aev06g3011 488 SUPERFAMILY RNI-like 224 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g3011 Aev-Chr6 31690991 31696376 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g3011 235 486 Receptor kinase-like Gene Family AT5G25910 35.000 4.84e-33 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g3011 - - gmx:100796078 231.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g3011 06 31690991 31696376 Aev02g1912 02 20954613 20955224 PCT
Aev02g1911 02 20948585 20949172 Aev06g3011 06 31690991 31696376 PCT