Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g2998 ATGTCTCGAAGATATGATAGCCGTACCACAATCTTCTCCCCTGAAGGGCGTCTTTACCAAGTGGAGTATGCAATGGAGGCCATTGGAAATGCTGGTACTGCAATAGGGATCCTATCGAAAGATGGGGTTGTTCTTGTTGGTGAAAAGAAGGTCACGTCTAAGTTGCTGCAAACCTCAACTTCCACCGAGAAGATGTATAAGATTGATGATCACGTTGCATGTGCCGTGGCTGGGATTATGTCTGACGCCAACATCTTAATCAACACTGCAAGGGTCCAAGCACAACGCTACACATTCGCTTACCAAGAGCCGATGCCTGTAGAGCAGTTGGTTCAATCTCTCTGTGATACCAAACAAGGGTATACACAATTTGGTGGTCTTCGCCCATTCGGAGTCTCATTCCTGTTTGCAGGATGGGACAAAAATTTCGGCTTTCAACTTTACATGAGTGACCCTAGTGGAAATTATGGCGGTTGGAAAGCTGCGGCTATCGGTGCAAACAACCAGGCAGCACAGTCAATACTAAAACAGGACTACAAAGACGAAATCACGAGGGAAGAAGCAGTTCAACTTGCTTTGAAGGTGCTAAGTAAAACTATGGACAGCACTAGTTTGACCTCGGATAAGCTTGAACTTGCAGAGGTTTTCCTCTCACCTTCTGGAAAGGTCAAGTACCAAGTTTGCTCCCCAGAGACTCTGACAAAGCTGTTGGTTAACATTTGGTCTTTGTTGCTGGAAAAGTATCGTGATTCAAGCCATTCTCGTCAAAGAAAAGTGTTGGCGTTGCTGTTGCAAATGAGAGAACAAGTAGAACAGGCTTCAATTAGAAGCAACCCTATAGGGCAAACACTATGTGACGAATGCAAATCTAACCCATCAAAGTACAAGTGCCCTGGATGCTCCATACAGTCATGCAGTCTTCCCTGTGTAAAAGCTCACAAAGATCGTACTGGATGTACCGGCAAGAGGAACCAGACACAGTTTGTTCCTCTTTCACAGTTTGATGACAATATCCTACTATCTGACTATAATTTGCTGGAGGAGGTGAAGAGGGTAGCTGAATCTGCTCAGAGAATGAGAACTAAATTGGGCATGTATGCATATTTTAAGTTACCGCATCACCTTAAGAGCATTCGAAGTGCTGCAGCAAGCCGGAGAACCAAAATACTCTTCCTTCCTAGTGGAATGTCTAAAAGACAGAAGAATCAGTCTCGATATGACCAAAGGAAGAAGTTGATATCTTGGACAATTGAATGGCGTTTTCATTCAACAGACATTGTTTTACATGATCATGGTGTCAATGAAAATACAAGCTTCTGCTCCATTCTAGAAAAGCACCTCAAACCTGGTCCTTGGAATAATCAGCTAAGGCAATTTTGTGAAGACAAACTGGATTGTCTCAAGCTTTTCATTCGTAAATACCCAAAGGGTCCAAGGTCACCCTTTAAAGAGTTGGATTTGAAAGCACCAATCAGACAACAACTAGAAAACTTAGTCATTTTAGAGTTTCCTGTTGTTTTTGTTTTCTTGCCATCTCACAGAATTGATTTTGAAGTTATTAAGGATGCCAATCCCACTATACCTAATAAATCACTTCAGAAAGACCATGAAGGCTACCAAAGCCCAGAAGGTGCATCATTTAGGGAGGAGGAGATTGAAGATGACAACAGCGCCGCAGATCCTAAGGTTTTCGATCTCATGAAGCATGTGGAATCAAGTTCATCACATCAAGCACCTATCCAAAATATGAGCTTTGAGAAAGCACCGAATGATTCATCAGATAAACCTCTGTTTGAAGGAGATACTACGGGTAACCTTTCAAATTCTTCCCTGAAAAACGAGGAACTAAAATTCTCTGAAGATATTGGGTTTGACTATGATCAAGATTTTATGGATGTCTATGCTGATCTTATGGCTGAAATGAGTCCGGATGACTTCTTCAATTTAGATGATGAATTTCCCAAGAAAACTGAAAATGATATGGGTCTGATTGGAACAAGTGAAGTATTCCCTGTACCAGGGGAGTTGGAGGAAGGGGAAATTCCAGATTAA 2052 0.4215 MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGTAIGILSKDGVVLVGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTFAYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNFGFQLYMSDPSGNYGGWKAAAIGANNQAAQSILKQDYKDEITREEAVQLALKVLSKTMDSTSLTSDKLELAEVFLSPSGKVKYQVCSPETLTKLLVNIWSLLLEKYRDSSHSRQRKVLALLLQMREQVEQASIRSNPIGQTLCDECKSNPSKYKCPGCSIQSCSLPCVKAHKDRTGCTGKRNQTQFVPLSQFDDNILLSDYNLLEEVKRVAESAQRMRTKLGMYAYFKLPHHLKSIRSAAASRRTKILFLPSGMSKRQKNQSRYDQRKKLISWTIEWRFHSTDIVLHDHGVNENTSFCSILEKHLKPGPWNNQLRQFCEDKLDCLKLFIRKYPKGPRSPFKELDLKAPIRQQLENLVILEFPVVFVFLPSHRIDFEVIKDANPTIPNKSLQKDHEGYQSPEGASFREEEIEDDNSAADPKVFDLMKHVESSSSHQAPIQNMSFEKAPNDSSDKPLFEGDTTGNLSNSSLKNEELKFSEDIGFDYDQDFMDVYADLMAEMSPDDFFNLDDEFPKKTENDMGLIGTSEVFPVPGELEEGEIPD* 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g2998 683 MobiDBLite consensus disorder prediction 526 554 - -
Aev06g2998 683 MobiDBLite consensus disorder prediction 587 608 - -
Aev06g2998 683 PANTHER PROTEASOME SUBUNIT ALPHA TYPE-4-A 1 239 IPR034647 GO:0019773
Aev06g2998 683 Pfam Proteasome subunit 30 214 IPR001353 GO:0005839|GO:0051603
Aev06g2998 683 Gene3D - 274 326 - -
Aev06g2998 683 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 1 259 IPR029055 -
Aev06g2998 683 ProSiteProfiles Proteasome alpha-type subunit profile. 20 237 IPR023332 -
Aev06g2998 683 SMART Proteasome_A_N_2 5 27 IPR000426 GO:0006511|GO:0019773
Aev06g2998 683 SUPERFAMILY HIT/MYND zinc finger-like 282 320 - -
Aev06g2998 683 CDD proteasome_alpha_type_4 3 215 - -
Aev06g2998 683 Pfam Proteasome subunit A N-terminal signature 5 27 IPR000426 GO:0006511|GO:0019773
Aev06g2998 683 ProSitePatterns Proteasome alpha-type subunits signature. 5 27 IPR000426 GO:0006511|GO:0019773
Aev06g2998 683 PANTHER PROTEASOME SUBUNIT ALPHA/BETA 1 239 - -
Aev06g2998 683 Pfam HIT zinc finger 283 311 IPR007529 -
Aev06g2998 683 ProSiteProfiles Zinc finger HIT-type profile. 285 319 IPR007529 -
Aev06g2998 683 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 4 232 IPR029055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g2998 Aev-Chr6 31577735 31585312 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g2998 - - gmx:100785007 619.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g2998 06 31577735 31585312 Aev02g1897 02 20824995 20825747 PCT