Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g2740 ATGTGTGCGTGTGGGAAAATGGAAGCGCGAGTGGGGGTGGCGGCGGTGGTAGAAGGTGGTGGGCAGAGAGGTGTGGCGGAGGGAGGGCATTGCGGGAGGAGGCTGTTGCAGCAGCAGCAGCAGAATCAGCAGTCACAGATGGGAACTGTGTCTCACCTTCTTGCTGGTGGCATAGCAGGTGCCTTTGGCAAGACCTGCACTGCACCGCTTTCTCGCCTCACTATCCTCTTTCAGGTGCAAGGTATGCAATTAGATGTGGCAGCATTGAGCAAACCTAGCATATGGTGTGAGGCTTCACGAATTGTCAATGAAGAAGGATTTAGAGCATTTTGGAAAGGCAATTTGGTGACCATAGCCCATCGTCTTCCATACTCTGCAGTCAATTTCTATTCTTATGAACAGTACAAGAAACTATTGCATTCACTTCTGGGGGAGAAACATAAAGGAAATACAAGTGTAGATGCCTTAGTGCACTTTGTAGGTGGTGGTTTGTCAGGCATAACAGCTGCTTCTGCCACATACCCTTTGGATCTAGTGAGAACACGACTTGCAGCACAGAGAAGTGCCATTTACTACAGGGGCATCTCACATGCTTTTAGTACCATATGCAGAGAAGAAGGGTTCTTGGGTCTGTATAAGGGACTTGGGGCAACATTATTGGGTGTTGGGCCTAGTATAGCTATAAGTTTTTCTGTTTATGAAAGCTTACGTTCTTTATGGCAGTCCCAAAGGCCTGATGATTCAACTATCATGGTCAGCCTCACATGTGGTAGTCTTTCTGGCATTGCATCATCAACAGCAACATTTCCGTTGGATCTAGTGAGGCGCAGGAAGCAGTTAGAGGGCGTTGGTGGTCGAGCACGCATCTATAATACCAGTTTGTTAGGGACATTTGGGCGCATAATTCAGAACGAAGGTGTTCGAGGGTTGTATCGAGGCATTCTTCCCGAGTACTACAAGGTTGTTCCCGGCGTGGGCATTTGCTTTATGACCTACGAGACATTGAAGATGCTTCTATCAAGCTTTCCAAGTTAA 1035 0.4773 MCACGKMEARVGVAAVVEGGGQRGVAEGGHCGRRLLQQQQQNQQSQMGTVSHLLAGGIAGAFGKTCTAPLSRLTILFQVQGMQLDVAALSKPSIWCEASRIVNEEGFRAFWKGNLVTIAHRLPYSAVNFYSYEQYKKLLHSLLGEKHKGNTSVDALVHFVGGGLSGITAASATYPLDLVRTRLAAQRSAIYYRGISHAFSTICREEGFLGLYKGLGATLLGVGPSIAISFSVYESLRSLWQSQRPDDSTIMVSLTCGSLSGIASSTATFPLDLVRRRKQLEGVGGRARIYNTSLLGTFGRIIQNEGVRGLYRGILPEYYKVVPGVGICFMTYETLKMLLSSFPS* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g2740 344 PRINTS Mitochondrial carrier protein signature 168 186 IPR002067 GO:0055085
Aev06g2740 344 PRINTS Mitochondrial carrier protein signature 212 230 IPR002067 GO:0055085
Aev06g2740 344 PRINTS Mitochondrial carrier protein signature 113 133 IPR002067 GO:0055085
Aev06g2740 344 PRINTS Mitochondrial carrier protein signature 52 65 IPR002067 GO:0055085
Aev06g2740 344 PRINTS Mitochondrial carrier protein signature 257 279 IPR002067 GO:0055085
Aev06g2740 344 PRINTS Mitochondrial carrier protein signature 65 79 IPR002067 GO:0055085
Aev06g2740 344 Gene3D Mitochondrial carrier domain 41 341 IPR023395 -
Aev06g2740 344 PANTHER SOLUTE CARRIER FAMILY 25 15 343 - -
Aev06g2740 344 SUPERFAMILY Mitochondrial carrier 46 335 IPR023395 -
Aev06g2740 344 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN 15 343 - -
Aev06g2740 344 Pfam Mitochondrial carrier protein 248 340 IPR018108 -
Aev06g2740 344 Pfam Mitochondrial carrier protein 47 140 IPR018108 -
Aev06g2740 344 Pfam Mitochondrial carrier protein 154 242 IPR018108 -
Aev06g2740 344 ProSiteProfiles Solute carrier (Solcar) repeat profile. 153 239 IPR018108 -
Aev06g2740 344 ProSiteProfiles Solute carrier (Solcar) repeat profile. 248 338 IPR018108 -
Aev06g2740 344 ProSiteProfiles Solute carrier (Solcar) repeat profile. 47 138 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g2740 Aev-Chr6 28930419 28934436 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g2740 6 344 Organic Solute Cotransporters AT3G55640 69.706 7.24e-168 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g2740 - K14684 gmx:100788060 532.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g2740 06 28930419 28934436 Aev06g2740 06 28930419 28934436 ECH
Aev02g1834 02 20153834 20157038 Aev06g2740 06 28930419 28934436 PCT