Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g2029 ATGGCTACCTCATCCTCCCTCTCCAACTTCTTCTCTTTTCTTTTACCCACAAAACAACCACCACCACCGCCGCCACAACTCACAGTCCCTCCTCCTCCTCCTTCTTCCCTAACTCGTCACAAACCCAGTGCCAACTCGGTCTCACTCGTTGCTCAACATGACCCAAACTCTCCATCATCATCATCATCACCATCTTCTGACTTGTCGTCCGTGATGTGCCCCTCTCTAGCGCACGCCAACATGCTGTTCTTCAGGTCTGCGTACAATGTGCAGGTGGTTGTGGACGATAACGAGCCCGAGGAGAGGCTCCTCAACAGGTTCCGAAGGGAAGTTATGAAGGCTGGCGTTATCCAAGAGTGTAAGAGGAGAAGGTTCTTCGAGAACAAGCAGGATGAGAAGAAGCGCAAGACCCGCGAGGCCGCCAAGCGTAACCGCAGGAGCAGGCGGCCGATGATGAGATCTCCGATGCTGAACAAGGCAGATGCCCCAACAACCAAGAAGGAAGAGGATGATGATAACTGGGATCTACCTGAGGAAGACACTCCTTATTGA 552 0.5272 MATSSSLSNFFSFLLPTKQPPPPPPQLTVPPPPPSSLTRHKPSANSVSLVAQHDPNSPSSSSSPSSDLSSVMCPSLAHANMLFFRSAYNVQVVVDDNEPEERLLNRFRREVMKAGVIQECKRRRFFENKQDEKKRKTREAAKRNRRSRRPMMRSPMLNKADAPTTKKEEDDDNWDLPEEDTPY* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g2029 183 PANTHER PROTEIN S21 FAMILY PROTEIN, PUTATIVE-RELATED 1 183 - -
Aev06g2029 183 Gene3D Ribosomal protein S8 104 142 IPR038380 -
Aev06g2029 183 PRINTS Ribosomal protein S21 family signature 125 135 IPR001911 GO:0003735|GO:0005840|GO:0006412
Aev06g2029 183 PRINTS Ribosomal protein S21 family signature 93 101 IPR001911 GO:0003735|GO:0005840|GO:0006412
Aev06g2029 183 PRINTS Ribosomal protein S21 family signature 113 123 IPR001911 GO:0003735|GO:0005840|GO:0006412
Aev06g2029 183 PRINTS Ribosomal protein S21 family signature 101 110 IPR001911 GO:0003735|GO:0005840|GO:0006412
Aev06g2029 183 TIGRFAM S21p: ribosomal protein bS21 90 146 IPR001911 GO:0003735|GO:0005840|GO:0006412
Aev06g2029 183 MobiDBLite consensus disorder prediction 16 38 - -
Aev06g2029 183 MobiDBLite consensus disorder prediction 13 71 - -
Aev06g2029 183 PANTHER MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S21 1 183 IPR001911 GO:0003735|GO:0005840|GO:0006412
Aev06g2029 183 MobiDBLite consensus disorder prediction 39 71 - -
Aev06g2029 183 Pfam Ribosomal protein S21 91 145 IPR001911 GO:0003735|GO:0005840|GO:0006412
Aev06g2029 183 Hamap 30S ribosomal protein S21 [rpsU]. 89 145 IPR001911 GO:0003735|GO:0005840|GO:0006412
Aev06g2029 183 MobiDBLite consensus disorder prediction 128 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g2029 Aev-Chr6 17672027 17673629 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g2029 - - jre:109013640 175.637