Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1905 ATGTCATACTCCAAGTGCCTTGGCTCAAACAGAGGCCCTTTGTGGGTTGCAGCTTTCTGTTTCAAGCAGCTCAAGAAATCTCAGCTGCTCGAGACTGACATTTCTTCCTCCGTTGACAACATTTTGGAGGATGAAATGAATGCTGTCTCCTATAGAGTGCTGGCCTATCTTCTTCTTGGTGTTGTCAGAATATACTCAAAAAAGGTTGAATATTTGTTACATGATTGCAATGAGGTGCTCACTAGAATAAAAAAATTTCTGATCAAAACTAAAGATGCTGCACTTGTGGAAACCTTGCGTATGTCTGTTATTATACCAGACAGATTTGAGTTGGACGCTTTCAATCTGGATATACTTGAAGATGCTGGGGAAGGCCATATTGCTCCCCAAGAAGAAATTACTCTTAAAGATGTTTTGTGTAACACAGAGGGATTTGGGCAGTTTTCTTTCGACAAGTTTGAGAAGTTTGATATTGGTCAAAATTCCTGTGCTGCCGATCACCTTTTGGTGGAAGACGTATGTCAGTTTCAGCAGGTGGATTTAGACTATGATCTTTTCCTGCCCAATAGTCCAACTAATCCAATGGAAGGCATGGATATATTTCAAAATAGTATATTCTCTCCAAAGGAACCAATGAACTTTAACACTGCTTTATTAGCTGAAGGAGTGGAAAAAGAATATGTCAACACATCTAGTCAAGATCAACAAATTAATGAAGATCATGAAATTCATGTAACTGTAACAAATGAGGATGAAATACTCGAAGAAAGAAGTAGAATCTCTAGAGAGGGATCTTTGGATGTCAGTATGTTTTCTGGGAGAGAGAAGGAACATGTTTTATCTGTTGAACCATGCAATAAATTTCATAAAGTTGATGAAGAGCAGAGTGTGGCTATGGAAACATCAAGCTCATTATGCCAAATACATCAAGAAATAAGAGAAGTTGTTGAATCAATAAATTTTCAAGAAAGTATGGAAAGGCCTCAAGAAGATAAATCCTATCCAAAAGAATGCATGGATTCCGGTAAATCTTCTGTTGCCAGGGAAAACCTTGAAGAAATCATTGAAGGGTCTGTTGAACAGCATGATAAGGAGAAAAGTTTTGAGTATCAAGAAAAGGTTTTACTTGAAGATGAAAGGCTTAATGTTATACCACGAGAGTCGAAGAATCTTGACATAACTCCTCAGTCTAAGTTTCAAGGAGGTTCAGCTGGAAAGCCAAAACAAGGTGCTGCTGCATCAGAAACTATGCTGATTGCTACACCCGCTAAAAGGGAGCGTGCCTTCTTTTCAAGGAAAAGTAAAATTGTTATTGATGAAATGTTGGTCTTGTCTAATGAGGAACTTAGAAAGAGTATACATGATGCAAGCGACTTAATTTCTAATCGCAGAAAATTCCGTCGCACTTTACTGGCTGTGCAGAGACAATCTCGCATTTCCAGACTTCCTGAGGGATTTCATGAATCTTTGTTACCTTGTTCCTCCGAAGAACTTCGTTTCCTGTTCTCTAAAAAGAAAATGAAACTATCAGATTCCTGTGAAACTGTGGAAACTCAAGAAAAGTTAGATGTGTTAGAATCTCGAACTGTTGGCAGTCCAGAGCATACAGAGACTGCTCTACAAACCCCACCAGATTTCCCAGGTTCCCTTGAAATTGTAGAAATTTCGGTGAAGTTAAATGTGTTAGAATCTCAAGCTGTTGGCAGTCCAGAGCATATAGAAACTGCTCCACGAACTCCTCCTCGGTTCCCAAAAATAAAAGTTCAATCAATTGATCAACCAGAGACAACTGAAATTCACAACTCTGATTATTTAGGGCCTTCAACTCCAATGGAAAGCATAGAGAGAGCGCAATCTTTGAAAAGGGATGAAGAGCTAAATCTTATGGAGGAGGAGATAAATTCATGTGAAACGGAGAATTCCCCATCGTTAGCTGAGTGGTCGGAGCGAACCAGGAAAGTTGCAAGGTACTTGCAGAGGGGTTTCCTGGATCTAAGTAAACAAAGAGATGAGGGAGTTGTGAACTTTTCACAAGTTTTACAAGGACGAATCAGGAAAGAATGTGCAAGGCTATTTTATGAAATACTGGTTTTGAAAACTACAAGTTATGTGGATGTGAAGCAAAAGTATGCTTATGGTGATATTGCAGTGTGTAAACTCCCTAAGTTAGATCAAACTTGTGGAACTGATGACTTGTAA 2199 0.3893 MSYSKCLGSNRGPLWVAAFCFKQLKKSQLLETDISSSVDNILEDEMNAVSYRVLAYLLLGVVRIYSKKVEYLLHDCNEVLTRIKKFLIKTKDAALVETLRMSVIIPDRFELDAFNLDILEDAGEGHIAPQEEITLKDVLCNTEGFGQFSFDKFEKFDIGQNSCAADHLLVEDVCQFQQVDLDYDLFLPNSPTNPMEGMDIFQNSIFSPKEPMNFNTALLAEGVEKEYVNTSSQDQQINEDHEIHVTVTNEDEILEERSRISREGSLDVSMFSGREKEHVLSVEPCNKFHKVDEEQSVAMETSSSLCQIHQEIREVVESINFQESMERPQEDKSYPKECMDSGKSSVARENLEEIIEGSVEQHDKEKSFEYQEKVLLEDERLNVIPRESKNLDITPQSKFQGGSAGKPKQGAAASETMLIATPAKRERAFFSRKSKIVIDEMLVLSNEELRKSIHDASDLISNRRKFRRTLLAVQRQSRISRLPEGFHESLLPCSSEELRFLFSKKKMKLSDSCETVETQEKLDVLESRTVGSPEHTETALQTPPDFPGSLEIVEISVKLNVLESQAVGSPEHIETAPRTPPRFPKIKVQSIDQPETTEIHNSDYLGPSTPMESIERAQSLKRDEELNLMEEEINSCETENSPSLAEWSERTRKVARYLQRGFLDLSKQRDEGVVNFSQVLQGRIRKECARLFYEILVLKTTSYVDVKQKYAYGDIAVCKLPKLDQTCGTDDL* 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1905 732 Coils Coil 614 634 - -
Aev06g1905 732 MobiDBLite consensus disorder prediction 393 412 - -
Aev06g1905 732 Gene3D Structural maintenance of chromosome 1. Chain E 649 726 IPR023093 -
Aev06g1905 732 PANTHER SISTER CHROMATID COHESION 1 PROTEIN 2 1 730 - -
Aev06g1905 732 MobiDBLite consensus disorder prediction 528 547 - -
Aev06g1905 732 Pfam N terminus of Rad21 / Rec8 like protein 10 91 IPR006910 GO:0005515
Aev06g1905 732 MobiDBLite consensus disorder prediction 324 345 - -
Aev06g1905 732 Pfam Conserved region of Rad21 / Rec8 like protein 671 719 IPR006909 -
Aev06g1905 732 PANTHER SCC1 / RAD21 FAMILY MEMBER 1 730 IPR039781 GO:0007062|GO:0008278
Aev06g1905 732 SUPERFAMILY "Winged helix" DNA-binding domain 650 723 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1905 Aev-Chr6 15972463 15989353 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1905 K06670 - qsu:112016663 464.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g1905 06 15972463 15989353 Aev06g1905 06 15972463 15989353 ECH