Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1657 ATGGCTTCTTTCATTTCAAGGCCACACTTTCCCGCACCATACACTCCCAATCTCAGCTCTTCCCCAAGAACATGGAAACTCTTCATTTTCACCCACGCTTTTCACTCAAAAACTCCCAACTGCAACAAAAACAACAAATTAGTACTTTCCCCCACCATTGCATTCTACACACAAGGCCTCTATGCACCTTCTTCCCCCACCAATTTGGGTAACAGGGCAGAGAAAAATGACCTAGAGAACGACTCCATATCGGTCCTCAACGAGCGAATTCGCCGCGATTACAGCAACAGGGAGGTTTCTAGAACCATGATTAACTCAGAGGAGGCTGACAAGTACATACAGATGGTGAAGAAGCAGCAGCAGAGAGGGCTTCAGAAGCTGAAAGGTGAGAGGGAAGGTAAAGATGGTACCTTCAGCTACAAGGTAGACCCTTATACCCTTCGTTCTGGGGACTATGTTGTGCATAAGAAGGTTGGTATTGGGAGGTTTGTTAGTATCAAATTGGATGTTTCGAAAAACTCCACAGAGCCAACTGAGTATGTTTTCATTGAGTATTCTGATGGGATGGCGAAGCTTCCGGTTAAGCAGGCTGCAAAAATGCTCTATAGATATAGTCTTCCAAATGAGAACAAAAGACCCCGTTCATTGAGTAAGTTGAATGATACTAGTAATTGGGAGAAAAGAAAGGTTAAAGGGAAGGTTGCGATACAGAAGATGGTTGTTGATTTGATGGAGCTCTATCTACATAGGCTCAAACAACGAAGGCCTCCATATCCGAAGAGTCCTGCCATGGCTGAATTCGCTTCTCAATTTCCTTACAAGCCCACCCCTGATCAGCAACAGGCATTTATTGACGTTGAGAAGGATTTGACAGATCGAGAAACTCCGATGGACAGATTAATTTGTGGAGATGTTGGTTTTGGTAAAACTGAGGTCGCATTACGTGCTATCCAGTGTGTTGTCTCAGCCAAAAAGCAAGCGATGATTCTGGCACCAACAAGAGTTCTTGCAAAACAACATTTTGATGTTATTTCAGAGCGCTTTTCTGTATATCCTGATGTTAGAGTTGGACTACTAAGCAGGTTTCAGACCAAAGCAGAGAAAGAAGAGCAGTTGGGCAAAATTAAGAATGGGGACCTGGACATTATTGTTGGAACACACTCACTTCTTGGAGATCGTGTTGTATATAATAGACTTGGCCTGCTTGTGGTTGATGAGGAACAGAGGTTTGGCGTTAAGCAGAAGGAGAGGATTGCTTCGTTTAAAACATCTGTGGATGTACTTACACTATCTGCAACCCCTATCCCGCGAACTCTTTATTTAGCATTGACAGGTTTTCGTGATGCTAGTTTAATTTCAACTCCACCTCCAGAGAGAGTTCCCATCAAGACTCATCTTTCTTCATTTAGTAAGGATAAAGTAATATCAGCTATCAAGTATGAGCTGGACCGTGGTGGTCAAGTTTTTTATGTTCTGCCACGTATTAAAGGACTTGAAGAAGTAATGTATTTTCTTGAAGAGTCATTCCCAGGTGTGGAAGTAGCCATTGCCCATGGGAAGCAATACTCAAGGCAATTAGAGGATACCATGGATAGATTTGCTCTAGGCGAAATAAAAATTCTTATCTGCACGAATATAGTAGAAAGTGGGCTTGATATTCAAAATGCAAATACCATCGTCATTCAGGATGTTCAACAATTCGGTCTTGCACAGTTGTACCAGTTACGTGGAAGAGTTGGACGGGCAGATAAGGAAGCACATGCACACTTATTTTACCCTGATAAAAGTATGCTCTCTGACCAAGCACTGGAGAGACTTGCAGCCCTTGAAGAATGCCATGAACTTGGTCAAGGTTTCCAACTAGCTGAGAGAGACATGGCTATAAGAGGTTTTGGTACAATTTTTGGTGAACAACAAACAGGAGATGTTGGAAATGTCGGCATTGATCTTTTCTTTGAGATGCTCTTTGAGAGTTTGTCAAAGGTTGAAGATCACCGTGTTGTTCCAATTCCTTATCAGTCAGTGCAGGTAGACTTGGACATCAATCCTCATCTCCCATCTGACTACATAAATTATCTGGAGAACCCCATGGAAATAATAAATGAAGCAGAGAGAGTTGCTGAGACAGACATCTGGAGTCTGATGCAATTTACAGAGAATTTGCGCCGCCAATATGGCAAAGAGCCTCGCTCCATGGAGGTTTTATTGAAGAAGCTTTACGTGAGGAGAATGGCCGCTGATATAGGGGTAACCCGAATTTACTCTTCAGGGAAGAATATCTTCATGCAAACAAATATAAATAAAAAGGTGTTCAAGATTATGATCGAGTCAATGGCATCAGATGTACATAAAAATTCATTGGTTCTTGAAGGTGACCAAATTAAGGCTGAACTTCTCTTAGAGCTACCAAAAGAACAACTCCTTAATTGGCTCTTTCAATGCTTGGCTGAACTTCATGCTTCGCTACCCGCCCTCATAAAATACTAG 2487 0.4226 MASFISRPHFPAPYTPNLSSSPRTWKLFIFTHAFHSKTPNCNKNNKLVLSPTIAFYTQGLYAPSSPTNLGNRAEKNDLENDSISVLNERIRRDYSNREVSRTMINSEEADKYIQMVKKQQQRGLQKLKGEREGKDGTFSYKVDPYTLRSGDYVVHKKVGIGRFVSIKLDVSKNSTEPTEYVFIEYSDGMAKLPVKQAAKMLYRYSLPNENKRPRSLSKLNDTSNWEKRKVKGKVAIQKMVVDLMELYLHRLKQRRPPYPKSPAMAEFASQFPYKPTPDQQQAFIDVEKDLTDRETPMDRLICGDVGFGKTEVALRAIQCVVSAKKQAMILAPTRVLAKQHFDVISERFSVYPDVRVGLLSRFQTKAEKEEQLGKIKNGDLDIIVGTHSLLGDRVVYNRLGLLVVDEEQRFGVKQKERIASFKTSVDVLTLSATPIPRTLYLALTGFRDASLISTPPPERVPIKTHLSSFSKDKVISAIKYELDRGGQVFYVLPRIKGLEEVMYFLEESFPGVEVAIAHGKQYSRQLEDTMDRFALGEIKILICTNIVESGLDIQNANTIVIQDVQQFGLAQLYQLRGRVGRADKEAHAHLFYPDKSMLSDQALERLAALEECHELGQGFQLAERDMAIRGFGTIFGEQQTGDVGNVGIDLFFEMLFESLSKVEDHRVVPIPYQSVQVDLDINPHLPSDYINYLENPMEIINEAERVAETDIWSLMQFTENLRRQYGKEPRSMEVLLKKLYVRRMAADIGVTRIYSSGKNIFMQTNINKKVFKIMIESMASDVHKNSLVLEGDQIKAELLLELPKEQLLNWLFQCLAELHASLPALIKY* 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1657 828 SUPERFAMILY CarD-like 141 211 IPR036101 -
Aev06g1657 828 SMART CarD_TRCF_2 146 248 IPR003711 -
Aev06g1657 828 SMART TRCF_a_2_a 678 776 IPR005118 GO:0006281
Aev06g1657 828 PANTHER FANCONI ANEMIA GROUP M FANCM FAMILY MEMBER 17 799 - -
Aev06g1657 828 Pfam DEAD/DEAH box helicase 297 435 IPR011545 GO:0003676|GO:0005524
Aev06g1657 828 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 470 627 IPR001650 -
Aev06g1657 828 CDD DEXHc_TRCF 261 454 - -
Aev06g1657 828 PANTHER TRANSCRIPTION-REPAIR-COUPLING FACTOR 17 799 - -
Aev06g1657 828 SMART helicmild6 499 583 IPR001650 -
Aev06g1657 828 SMART ultradead3 271 463 IPR014001 -
Aev06g1657 828 Gene3D - 150 210 - -
Aev06g1657 828 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 324 597 IPR027417 -
Aev06g1657 828 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 290 452 IPR014001 -
Aev06g1657 828 SUPERFAMILY TRCF domain-like 672 818 IPR037235 -
Aev06g1657 828 Gene3D - 147 661 IPR027417 -
Aev06g1657 828 Gene3D - 211 454 IPR027417 -
Aev06g1657 828 Gene3D - 674 821 IPR037235 -
Aev06g1657 828 Pfam TRCF domain 679 768 IPR005118 GO:0006281
Aev06g1657 828 Pfam CarD-like/TRCF domain 147 247 IPR003711 -
Aev06g1657 828 Pfam Helicase conserved C-terminal domain 476 582 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1657 Aev-Chr6 12443986 12451956 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1657 - - adu:107494618 1406.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g1657 06 12443986 12451956 Aev06g1657 06 12443986 12451956 ECH