Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1653 ATGCCGCTATCCACTGCCGCAGTCGCCGCCTCACCGCCGACGGCGGTAGAAGAGGAGCGATCACTCGACGGCAACGGGTGCGATGATATCGACGACGGCGTCATTTCGCTCGACGAGGAGGGTTTCCCGTCACAAATCCCATTCGAAGACGCCTCGCCAAACCTTAGCGGAGAACAATCGGAGACGGCGACGGAAACTAGCGGCTTTGCCGCAGATTTCTATCGCTGCGGCACCGACTGGTCCTCGCTATTGTCGCCGGAGGATCGTAGACGCAGTGGCAGTTTCGATTCGGTTTCTTCTGGGAAGAAGCTGAAGCAGGCGAATCTGTTTCAGATTTGGGGTTTCAAACGAAACGACGCCGTTGAATCCGCTTCTAATTCTTTGGTTGAGTCTAAACTCAATCAAAGTGGCTATTTTGGTGATGGAAGCGGGAGCAGTGATTTTTCTGAGAAGAAGATCGTGAAACCTGGAAATTGGGGTTCGATTTTGCATGATACTGGGGAAGAGTTCGAGAAATCAAAATCTTCTCGCAAGAGAAAGGAAAAGCACGAAGGGACTACGGTTACGCGTCCCTGTCCGTTTTATAAGAAAATTCCAGGGACAAGCTTCACTGTTGATGCATTTCGTTATGGGTGTGTTGAAGGGTGCTCGGCGTATTTTCTCAGTCACTTCCATTACGATCACTATGGTGGCCTGAGCAAGAAATGGTCACATGGTCCTATATATTGCTCTGCTCTCACCGGAAGGCTTGTTCAAATGTGTCTCTCGGTAAACCCTTTGTACATCTGCCCTCTGGAATTTAACGTTGAACGTGTGATCGATGGTGTCAAAGTGACTTTGTTGGAAGCTAATCATTGCCCTGGTGCAGCTTTGATCCACTTTGACCTCCCAAATGGTCAACGATTTTTGCACACAGGCGACTTTAGAGCTTGTAAACAGATGCAAGCTTACCATCTTCTTGTAAATCAACGTGTAAATGTCCTTTATTTGGATACCACATATTGCAATCCAAAGTACAATTTTCCTGCCAAGGAAGATGTACTCAATTATGTCATCAAAATTACGAAGAAACACCTCAAAATGCATCCCAAAACTTTGGTGGTTGTTGGGGCATACAGTATTGGCAAAGAATGTGTTTATCTTTCTATTTCTAAGGCACTTGGGGTGAAAGTTTATGCAAATGCTTCAAGAAGGAGAATTTTGCTAGCTTTTGATTGGCCTGAGCTTTCAGATAATCTCTGTACTAATGGAAATAACACACTTCTGCATGTTCTGCCCATGTCATCTCTTAGACTTGAGTCCTTAAAGGATTACTTGAAGACCTACAAGGAACAATTCACAGCAATATTAGCATTTCGTCCAACAGGTTGGACTTTCAGTGAGAAGATACGCAATGATCTGGAACTAATTAAACCTATTTCCAAAGGAAATATCACGATATATGGGGTTCCCTACAGTGAGCATTCCAGCTTCACAGAACTGCGAGATTTTGTTCAGTTTTTGAGGCCTGATAAAATAGTTCCAACTGTGAATGTTGGGAATGCCGCTAATCGAGAAAAGATGCAATCCTACTTCCGGGACTGGTTGAAGGGCTAA 1596 0.4511 MPLSTAAVAASPPTAVEEERSLDGNGCDDIDDGVISLDEEGFPSQIPFEDASPNLSGEQSETATETSGFAADFYRCGTDWSSLLSPEDRRRSGSFDSVSSGKKLKQANLFQIWGFKRNDAVESASNSLVESKLNQSGYFGDGSGSSDFSEKKIVKPGNWGSILHDTGEEFEKSKSSRKRKEKHEGTTVTRPCPFYKKIPGTSFTVDAFRYGCVEGCSAYFLSHFHYDHYGGLSKKWSHGPIYCSALTGRLVQMCLSVNPLYICPLEFNVERVIDGVKVTLLEANHCPGAALIHFDLPNGQRFLHTGDFRACKQMQAYHLLVNQRVNVLYLDTTYCNPKYNFPAKEDVLNYVIKITKKHLKMHPKTLVVVGAYSIGKECVYLSISKALGVKVYANASRRRILLAFDWPELSDNLCTNGNNTLLHVLPMSSLRLESLKDYLKTYKEQFTAILAFRPTGWTFSEKIRNDLELIKPISKGNITIYGVPYSEHSSFTELRDFVQFLRPDKIVPTVNVGNAANREKMQSYFRDWLKG* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1653 531 Pfam DNA repair metallo-beta-lactamase 408 514 IPR011084 -
Aev06g1653 531 Gene3D - 198 510 IPR036866 -
Aev06g1653 531 MobiDBLite consensus disorder prediction 49 65 - -
Aev06g1653 531 SUPERFAMILY Metallo-hydrolase/oxidoreductase 214 524 IPR036866 -
Aev06g1653 531 MobiDBLite consensus disorder prediction 1 65 - -
Aev06g1653 531 PANTHER DNA CROSS-LINK REPAIR PROTEIN SNM1 85 530 - -
Aev06g1653 531 Gene3D - 340 488 - -
Aev06g1653 531 PANTHER DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED 85 530 - -
Aev06g1653 531 CDD SNM1A-1C-like_MBL-fold 173 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1653 Aev-Chr6 12421741 12429265 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1653 K15340 - gmx:100790844 792.727