Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1645 ATGATGGGTTATTCTAATTCTAAGAATTTGTGGATTATTGTGTGTGTGATTTTGGCATCATTGGCATCAGAAGCAATATGTGGAACACCAAGGAGACCAGTGGATGTAGAATTTGGAAGAAACTATGTCCCAACTTGGGCTTATGATCACATCAAATACTTCAATGCTGGTAAAGAGGTTCAGCTTCTTCTTGACAAATATACAGGTACTGGGTTCCAATCCAAAGGATCATACTTGTTTGGTCACTTCAGCATGTACATTAAGATGGTTCCTGGTGATTCAGCTGGCACTGTCGCTGCTTTTTATCTTTCTTCACAAAACTCAGAGCATGATGAGATAGACTTTGAGTTCTTGGGGAACAGAACAGGACAACCTTACATTTTGCAAACAAATGTGTTCACTGGTGGGAAGGGTGATAGGGAACAGAGGATCTATCTCTGGTTTGACCCAACAAAAGAATACCACAGATACTCTGTTCTATGGAACTTGTATCAGATTGTGTTCTTGGTGGACGATGTCCCAATCAGGGTGTTCAAGAACAGCAAGGACTTAGGAGTGAAATTCCCATTTGACCAACCAATGAAGATATACAACAGCCTATGGAATGCCGATGATTGGGCCACAAGAGGTGGATTAGAGAAAACAGATTGGTCCAAAGCCCCCTTCATAGCATCCTACAAAGGCTTCCATATCGATGGGTGTGAGGCCTCTGTGAATGAAAAGTTCTGTGCCACACAAGGCAAAAGATGGTGGGATCAACCTGAATTTCAAGACCTTGATGCTGCTCAATGGAGAAGACTCAGATGGGTGCGCCAGAAATACACAATTTACAACTATTGCACTGATAGGAAAAGATACCCTCAACTTCCTCCTGAATGCAAAAGAGACCGTGACATTTAA 900 0.4211 MMGYSNSKNLWIIVCVILASLASEAICGTPRRPVDVEFGRNYVPTWAYDHIKYFNAGKEVQLLLDKYTGTGFQSKGSYLFGHFSMYIKMVPGDSAGTVAAFYLSSQNSEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKEYHRYSVLWNLYQIVFLVDDVPIRVFKNSKDLGVKFPFDQPMKIYNSLWNADDWATRGGLEKTDWSKAPFIASYKGFHIDGCEASVNEKFCATQGKRWWDQPEFQDLDAAQWRRLRWVRQKYTIYNYCTDRKRYPQLPPECKRDRDI* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1645 299 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 22 226 IPR000757 GO:0004553|GO:0005975
Aev06g1645 299 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 9 297 IPR044791 GO:0004553
Aev06g1645 299 CDD GH16_XET 33 293 IPR016455 GO:0010411|GO:0016762|GO:0042546
Aev06g1645 299 PIRSF EndGlu_transf 4 298 IPR016455 GO:0010411|GO:0016762|GO:0042546
Aev06g1645 299 Gene3D - 24 299 - -
Aev06g1645 299 SUPERFAMILY Concanavalin A-like lectins/glucanases 35 297 IPR013320 -
Aev06g1645 299 ProSitePatterns Glycosyl hydrolases family 16 active sites. 112 122 IPR008263 GO:0004553|GO:0005975
Aev06g1645 299 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 9 297 - -
Aev06g1645 299 Pfam Glycosyl hydrolases family 16 39 219 IPR000757 GO:0004553|GO:0005975
Aev06g1645 299 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 246 293 IPR010713 GO:0005618|GO:0006073|GO:0016762|GO:0048046
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1645 Aev-Chr6 12317959 12327503 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g1645 14 299 Glycoside Hydrolase AT5G13870 79.720 0.0 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1645 K08235 - gmx:547775 575.859