Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1643 ATGGGAGCGAGCAGCGACCCGACCCAAGACGGTTCCGACGAGCAGCAAAAACGGTCGGAGATCTACACCTACGAGGCGCCATGGCACATCTACGCCATGAACTGGAGCGTTCGCCGGGACAAAAAGTACCGTCTCGCCATCGCCTCCCTCCTCGAGCAGTACCCCAACCGCGTCGAGATCGTCCAGCTCGACGACTCCACCGGCGAGATCCGATCCGACCCGAATCTCTCCTTCGAGCACCCATACCCTCCCACCAAGGCCATCTTCATCCCCGACAAGGAGTGCGCCCGCCCTGACCTCCTCGCCACCTCCTCCGACTTCCTCCGCGTATGGCGCCTCTCCGACCCAGACGAGAGCTCCGCCGCCGCCGCCAACCCTAACCACCGTGTCGAGCTCAAGAGCCTCCTCAATGGGAACAAGAACAGTGAGTACTGTGGCCCATTGACTTCGTTCGATTGGAATGAGGCGGAGCCGAGGAGGATTGGGACTTCGAGCATTGATACTACGTGTACCATTTGGGATATTGAGAAGGAGGCTGTGGATACTCAGCTTATTGCGCATGATAAGGAGGTGTATGATATTGCTTGGGGTGGTGTTGGGGTTTTTGCGTCCGTTTCTGCTGATGGGTCTGTTAGGGTTTTTGACCTTAGGGATAAGGAGCATTCTACTATTATCTATGAGAGTTCTGAGCCTGATACGCCATTGGTTAGGCTCGGATGGAACAAGCAGGACCCTAGGTACATGGCTACCATCATAATGGATAGTGCTAAGGTTGTGGTGCTTGATATTCGCTTCCCGACGCTTCCAGTGGTGGAGTTACAGAGGCACCAGGCAAGTGTGAATGCAATTGCCTGGGCACCTCATAGTTCTTGCCATATTTGCACAGCCGGGGATGATTCGCAGGCTTTGATTTGGGACCTTTCTTCAATGGGCCAGCCTGTGGAGGGTGGGTTGGACCCTATTCTTGCTTACACTGCTGGTGCAGAGATTGAGCAGCTTCAGTGGTCATCTTCTCAGCCAGATTGGGTCGCCATTGCTTTCTCCACCAAGCTTCAGATTCTGCGGGTGTGA 1071 0.5509 MGASSDPTQDGSDEQQKRSEIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEIVQLDDSTGEIRSDPNLSFEHPYPPTKAIFIPDKECARPDLLATSSDFLRVWRLSDPDESSAAAANPNHRVELKSLLNGNKNSEYCGPLTSFDWNEAEPRRIGTSSIDTTCTIWDIEKEAVDTQLIAHDKEVYDIAWGGVGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKVVVLDIRFPTLPVVELQRHQASVNAIAWAPHSSCHICTAGDDSQALIWDLSSMGQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQILRV* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1643 356 Pfam WD domain, G-beta repeat 273 306 IPR001680 GO:0005515
Aev06g1643 356 Pfam WD domain, G-beta repeat 184 215 IPR001680 GO:0005515
Aev06g1643 356 Gene3D - 12 355 IPR015943 GO:0005515
Aev06g1643 356 ProSitePatterns Trp-Asp (WD) repeats signature. 293 307 IPR019775 -
Aev06g1643 356 SMART WD40_4 266 306 IPR001680 GO:0005515
Aev06g1643 356 SMART WD40_4 129 174 IPR001680 GO:0005515
Aev06g1643 356 SMART WD40_4 177 215 IPR001680 GO:0005515
Aev06g1643 356 PANTHER WD REPEAT CONTAINING PROTEIN 13 356 IPR045159 -
Aev06g1643 356 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 273 309 - -
Aev06g1643 356 ProSiteProfiles Trp-Asp (WD) repeats profile. 273 309 IPR001680 GO:0005515
Aev06g1643 356 SUPERFAMILY WD40 repeat-like 29 311 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1643 Aev-Chr6 12294335 12296418 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1643 K11805 - cit:102615088 678.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g1643 06 12294335 12296418 Aev06g1643 06 12294335 12296418 ECH