Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1563 ATGACAAAGCGACGGCGGAAGCTAGGCGATGAAGTTGTGAAGAACAAGGGCTGCAATGGCATTTGGAGGTTGGAGCTTGAAGGAGATGCAGCAAGAGGGACATGGAGTTCTGAGGAGGTTCAAGTGAAGGGAGTTTGGGCAAATGGACTGTTCAATATTGGGTCAGAGGCAGAATACATCAAGTACAAAGACCCTAATCTGTCAATTGATTCAAGAGTGGAGGATCTTGTTAGCAGGATGACCCTTGAGGAGAAAATTGGCCAAATGTTGCAGATTGAGCGCAAATATGCATCTGCTGATTTGGTCAACAAGTATTTTATTGGGAGTGTTATGAGTGAGGGAGGGAGTATGCCTGCTCCACAGGCTTCTGCTGAAGCCTGGATTGACATGGTGAATGAATTTCAAAAGGGTGCTTTATCGACCCGGCTTGGAATTCCCATGTTTTATGGCATTGATGCTGTTCATGGCCACAACACTATTTACAAAGCAACCATTTTCCCTCACAATATTGGGCTTGGAGCTACCAGGGACCCTGAACTTGTTAAGAGAATTGGTGTTGCAACGGCTCTTGAAGTTAGAGCAACAGGAATACAATATACATATGCACCTTGTATAGCAGTATGTCGAGATCCAAGATGGGGTCGGTGTTATGAAAGCTACAGCGAAGATCCTAAATTAGTTCAAGCAATGACAGAAATCATATCAGGATTGCAAGGGGAAATCCCTGCTAATTTACCAAAGGGAGTTCCTTTTTTGGGTGGAAGAGAAAAGGTCATAGGCTCTGCTAAACACTATGTGGGTGATGGTGGAACAATTAATGGGATTGATGAGTACAACACTGTTGTAGATAAAGATGAATTGATGAGAATTCATATGCCAGGCTACTTTAGCGCTATTAACAAGGGCGTCGCAACCATTATGGTCTCCTACTCCAGTTGGAATGGAGTGAAAATGCATGCTAACCGTGACCTTGTTACCGGCTACCTCAAGAACACTATCCATTTCAAGGGCTTGGTTATTTCAGATTTTGAGGGCATAGATAAGATCACCTCTCCACCTCATTCGAATTTCACCTACTCAGTCGAAGCAGGAGTTTCGGCTGGCATTGACATGTTCATGGTTCCAAAATTCTACATAGAATTCATAGATGATCTAACTCGATTGGTGACAAGAAAGATCATTCCTATGAGTCGAATTGATGACGCTGTAAAAAGAATTTTGCGGGTTAAGTTCGTGATGGGTCTTTTTGAGAACCCTTTTGCCGATTACAGTATGGTCAGATATCTGGGAATTCCGGAGCATAGAAAATTGGCTAGGGAAGCTGTAAGGAAATCGCTGGTCCTTCTGAAAAATGGTGAACCTGCTGAGAAGCCTATGTTGCCTCTTCCTAAAAGGGCGTCGAAAATACTTGTAGCCGGAAGCCATGCAGATAATCTTGGATATCAGTGTGGTGGCTGGACAATTGAATGGCAAGGAGTTAGCGGCAATGATCTCCTAAAAGGGACAACAATTCTCACTGCTATTAAAAACACAGTTGATCCTGAGACCATAGTGACCTACAAGGAGAACCCCGATGCAGAATTCGTCAAGTCCAATGGATTCTCTTGTGCCATAGTTGTAGTAGGAGAGCATCCTTATGCCGAATATCATGGTGACAACATGAACTTGACGATTCCCGAACCGGGCCCTGAGACCATAACAAATGTTTGTGGAGCCATAGAATGTGTGGTGATCATTATTTCCGGCCGCCCTGTAGTTATCGAACCGTATCTTGCTTCAATTGATGCACTCGTTGCTGCGTGGCTTCCAGGAAGTGAGGGCCAGGGTGTTGCAGATGTGTTATTTGGTGACTATGGTTTCACAGGGAAGCTTCCAAGGACATGGTTCAAAACTGTTGATCAATTACCAATGAATGTTGGAGATCCTCACTATGATCCACTCTTCCCATTTGGATTTGGCATTTCTACCAAACCTACTAAGGCCATTTACTCAGAGTAG 1998 0.4399 MTKRRRKLGDEVVKNKGCNGIWRLELEGDAARGTWSSEEVQVKGVWANGLFNIGSEAEYIKYKDPNLSIDSRVEDLVSRMTLEEKIGQMLQIERKYASADLVNKYFIGSVMSEGGSMPAPQASAEAWIDMVNEFQKGALSTRLGIPMFYGIDAVHGHNTIYKATIFPHNIGLGATRDPELVKRIGVATALEVRATGIQYTYAPCIAVCRDPRWGRCYESYSEDPKLVQAMTEIISGLQGEIPANLPKGVPFLGGREKVIGSAKHYVGDGGTINGIDEYNTVVDKDELMRIHMPGYFSAINKGVATIMVSYSSWNGVKMHANRDLVTGYLKNTIHFKGLVISDFEGIDKITSPPHSNFTYSVEAGVSAGIDMFMVPKFYIEFIDDLTRLVTRKIIPMSRIDDAVKRILRVKFVMGLFENPFADYSMVRYLGIPEHRKLAREAVRKSLVLLKNGEPAEKPMLPLPKRASKILVAGSHADNLGYQCGGWTIEWQGVSGNDLLKGTTILTAIKNTVDPETIVTYKENPDAEFVKSNGFSCAIVVVGEHPYAEYHGDNMNLTIPEPGPETITNVCGAIECVVIIISGRPVVIEPYLASIDALVAAWLPGSEGQGVADVLFGDYGFTGKLPRTWFKTVDQLPMNVGDPHYDPLFPFGFGISTKPTKAIYSE* 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1563 665 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 446 655 IPR036881 GO:0004553|GO:0005975
Aev06g1563 665 Pfam Glycosyl hydrolase family 3 C-terminal domain 446 655 IPR002772 GO:0004553|GO:0005975
Aev06g1563 665 Pfam Glycosyl hydrolase family 3 N terminal domain 81 409 IPR001764 GO:0004553|GO:0005975
Aev06g1563 665 PRINTS Glycosyl hydrolase family 3 signature 212 228 IPR001764 GO:0004553|GO:0005975
Aev06g1563 665 PRINTS Glycosyl hydrolase family 3 signature 166 185 IPR001764 GO:0004553|GO:0005975
Aev06g1563 665 PRINTS Glycosyl hydrolase family 3 signature 328 346 IPR001764 GO:0004553|GO:0005975
Aev06g1563 665 PRINTS Glycosyl hydrolase family 3 signature 258 274 IPR001764 GO:0004553|GO:0005975
Aev06g1563 665 PRINTS Glycosyl hydrolase family 3 signature 142 158 IPR001764 GO:0004553|GO:0005975
Aev06g1563 665 PANTHER PERIPLASMIC BETA-GLUCOSIDASE-RELATED 41 665 - -
Aev06g1563 665 SUPERFAMILY (Trans)glycosidases 60 445 IPR017853 -
Aev06g1563 665 Gene3D - 432 657 IPR036881 GO:0004553|GO:0005975
Aev06g1563 665 PANTHER BETA-D-GLUCOSIDE GLUCOHYDROLASE 41 665 - -
Aev06g1563 665 Gene3D - 55 430 IPR036962 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1563 Aev-Chr6 11429780 11442040 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g1563 60 660 Glycoside Hydrolase AT5G20950 70.050 0.0 874
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1563 K05349 - gmx:100779642 1113.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g1563 06 11429780 11442040 Aev06g1563 06 11429780 11442040 ECH