Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1555 ATGGCTATAAATAAGGCGAAAGCCATAGCAACAAAACTCGCACTCTGTTCTCTGCTTCAAGTCTCGCTCTTTACTACGCGAAGAAGCCTCAGAGAACTTGGTCTCTACTATCACTACCCTCTAAGAACAATGGCTTCCCATATTGTTGGATACCCACGCATGGGCCCTAAGAGAGAGCTCAAGTTCGCTCTTGAGTCTTTCTGGGACGGTAAGAGCAGCGCCGAGGATTTGAAGAAGGTTGCTGCTGATCTCAGAGCTTCCATCTGGAAGCAGATGGCTGATGCTGGGATCAAGTACATCCCCAGCAACACTTTCTCATACTACGACCAGGTTCTTGACGCCACCGCCACCCTCGGCGCCGTTCCTCCCCGCTATGGCTGGACCGGCGGCGAGATCGGATTTGACACTTACTTCTCTATGGCCAGGGGTAACGCCACCGTCCCTGCTATGGAGATGACCAAGTGGTTCGACACCAACTACCACTTCATTGTTCCAGAATTGGGACCTGATGTGAAGTTCACCTATGCCTCCCACAAGGCCGTTGAAGAATACAAGGAGGCCAAGGCGCTTGGAGTTGAAACCGTTCCAGTCCTCATTGGCCCAGTCTCATACTTGTTGCTCTCCAAACCCGCCAAGGGTGTTGAGAAGACCTTCTCTCTCCTCTCCCTTCTCCCCAAGGTCCTCGCTGTCTACAAGGAAGTTGTGGCTGATCTTAAGGCTGCTGGTGCTTCATCAATTCAGTTTGATGAGCCTACCCTTGTGTTGGACCTTGAGGCTCACAAGTTGCAAGCATTCACCGAGGCATACGCAGAACTTGCATCTGCCCTGTCTGGTTTGCATGTTCTTGTCGAGACCTACTTTGCTGATATCCCTGCTGAGGCATACAAGACCCTCACATCTCTGAGCGGCGTCACCGCATATGGATTTGATTTGGTCCGTGGAACTAAGGCTCTTGACTTGATCAAGGGTGGATTCCCAAGTGGAAAATACCTCTTTGCTGGTGTGGTTGATGGAAGGAACATTTGGGCTAATGATCTTGCTGCTTCTCTCAGCACCCTGCATGCTCTTGAAGGCATTGTGGGCAAAGATAAGCTTGTTGTGTCCACCTCTTGCTCACTTCTTCACACTGCTGTCGATCTTGTCAACGAAACCAAGTTGGATGATGAGATCAAGTCATGGCTTGCTTTTGCTGCCCAAAAGATTGTTGAAGTAAATGCATTGGCTAATGCACTGGCTGGTAACAAGGATGAGGCCTTCTTCGCTGCTAATGCTGCTGCTCAGGCTTCAAGAAAGTCCTCTCCAAGAGTGACCAATGAAGCTGTTCAGAAGGCTGCTGCTGCATTGAAGGGATCTGACCACCGCCGTGCCACTAATGTCAGTGCCAGACTGGATGCCCAACAAAAGAAGCTTAACCTCCCAGTCCTTCCTACAACCACCATTGGATCCTTCCCTCAGACTCCAGAGCTGAGGAGGGTGCGCCGTGAATACAAGGCTGGAAAGATCTCTGAGGAAGAATATGTTACAGCAATCAAGGAAGAAATTCGCAAAGTTGTTGAACTCCAAGAAGAGCTTGATATTGATGTGTTGGTCCATGGAGAGCCCGAGAGGAATGACATGGTTGAGTACTTTGGTGAGCAATTGTCAGGCTTTGCCTTCACCGTTAACGGATGGGTGCAATCCTATGGATCTCGTTGCGTGAAGCCACCAATCATCTACGGTGATGTGAGCCGCCCCAAGCCAATGACCGTCTTCTGGTCATCAACTGCTCAGAGCATGACCAAGCGCCCAATGAAGGGAATGCTTACTGGCCCAGTCACCATTCTCAACTGGTCCTTTGTTAGAAACGACCAGCCAAGATCTGAGACCACCTACCAGATCGCTTTGGCCATCAAGGATGAAGTAGAGGACCTCGAGAAGGCCGGCATTAACGTGATCCAAATCGATGAGGCCGCATTGCGTGAGGGTCTTCCATTGAGGAAGTCAGAGCAAGCTCACTACTTGGACTGGGCTGTCCACTCCTTCAGAATCACCAACGTCGGTGTTCAGGATACCACTCAGATTCACACCCACATGTGCTACTCCAACTTCAACGACATCATCCACTCCATCATCGACATGGATGCCGATGTCATCACCATCGAGAACTCCCGTTCGGACGAGAAGCTCCTCTCAGTGTTCCGTGAAGGAGTGAAGTACGGTGCCGGTATTGGCCCTGGTGTCTACGACATCCACTCCCCAAGAATCCCACCAACTGAGGAAATTGCTGACAGGATCAACAAGATGCTTGCAGTGCTCGAGAAGAACATCTTGTGGGTCAACCCTGACTGTGGTCTCAAGACCCGTAAGTACACTGAGGTGAAGCCAGCACTCACAAACATGGTTGCTGCTGCAAAACTCATCCGTAACGAGCTTGCCAAGTGA 2421 0.506 MAINKAKAIATKLALCSLLQVSLFTTRRSLRELGLYYHYPLRTMASHIVGYPRMGPKRELKFALESFWDGKSSAEDLKKVAADLRASIWKQMADAGIKYIPSNTFSYYDQVLDATATLGAVPPRYGWTGGEIGFDTYFSMARGNATVPAMEMTKWFDTNYHFIVPELGPDVKFTYASHKAVEEYKEAKALGVETVPVLIGPVSYLLLSKPAKGVEKTFSLLSLLPKVLAVYKEVVADLKAAGASSIQFDEPTLVLDLEAHKLQAFTEAYAELASALSGLHVLVETYFADIPAEAYKTLTSLSGVTAYGFDLVRGTKALDLIKGGFPSGKYLFAGVVDGRNIWANDLAASLSTLHALEGIVGKDKLVVSTSCSLLHTAVDLVNETKLDDEIKSWLAFAAQKIVEVNALANALAGNKDEAFFAANAAAQASRKSSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPVLPTTTIGSFPQTPELRRVRREYKAGKISEEEYVTAIKEEIRKVVELQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTVNGWVQSYGSRCVKPPIIYGDVSRPKPMTVFWSSTAQSMTKRPMKGMLTGPVTILNWSFVRNDQPRSETTYQIALAIKDEVEDLEKAGINVIQIDEAALREGLPLRKSEQAHYLDWAVHSFRITNVGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPPTEEIADRINKMLAVLEKNILWVNPDCGLKTRKYTEVKPALTNMVAAAKLIRNELAK* 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1555 806 Pfam Cobalamin-independent synthase, N-terminal domain 46 358 IPR013215 GO:0003871|GO:0008270|GO:0008652
Aev06g1555 806 Gene3D - 433 801 IPR038071 -
Aev06g1555 806 SUPERFAMILY UROD/MetE-like 46 438 IPR038071 -
Aev06g1555 806 TIGRFAM met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 49 802 IPR006276 GO:0003871|GO:0008270|GO:0009086
Aev06g1555 806 PANTHER COBALAMIN-INDEPENDENT METHIONINE SYNTHASE 44 806 - -
Aev06g1555 806 Hamap 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 44 803 IPR006276 GO:0003871|GO:0008270|GO:0009086
Aev06g1555 806 PIRSF Met_synth_MetE 43 806 IPR006276 GO:0003871|GO:0008270|GO:0009086
Aev06g1555 806 Gene3D - 48 568 IPR038071 -
Aev06g1555 806 SUPERFAMILY UROD/MetE-like 440 802 IPR038071 -
Aev06g1555 806 CDD CIMS_N_terminal_like 46 410 - -
Aev06g1555 806 PANTHER 5-METHYLTETRAHYDROPTEROYLTRIGLUTAMATE--HOMOCYSTEINE METHYLTRANSFERASE 44 806 - -
Aev06g1555 806 CDD CIMS_C_terminal_like 476 799 IPR002629 GO:0003871|GO:0008270|GO:0009086
Aev06g1555 806 Pfam Cobalamin-independent synthase, Catalytic domain 475 798 IPR002629 GO:0003871|GO:0008270|GO:0009086
Aev06g1555 806 Coils Coil 503 523 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1555 Aev-Chr6 11352955 11357717 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1555 K00549 - gmx:547643 1430.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g1555 06 11352955 11357717 Aev05g1682 05 14058393 14065526 PCT