Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1550 ATGAACGTCGATCGTCACCTGAAGGATCTCTCGAGCTCCTCCAAGCGCATCCCTTCGGACAGAGACTTCCATTTCTTCCGCAACTTCGAGGAATTTAGGCACCCAATCGAAGAAATCGCGAGGCGTTCGCAGTCGATGCTGGATAGCATCGGTGCCGCGACGAGTGCATGGAGCAGCGGCGTCGAATTCCCGGCCGACATCGACGAAGCGTATGACTGGGTGGTGGACATGAACGACGAGCTGCTCTCGTGGTTCGACGAGTCGGTGGCCGAGGTGAAGAAGGCGAGGGAGGAGGAGGAGTTCGAGGAGGTTGAGATGGAGAACGGGTTAGGGTTGGTGAGGGTGAAGAAGGAAAGTGGAAAAGGTAAGAAGGTGAAATCAACGGCGGAGACTACGACGGATACGACGGCGAAGCCGAAAGTGTCGTTTCATTTGGCGACGGTGAGGAAGCCTCAGGAAGTGTACGACATTGTGGTTAACAATGCGAATCAGCCGTTTGAGCATGTTTGGTTGGAGAAGAGTGAGGATGGTCAGAGGTTTATGCATCCTCTGGAGAAACACAATGCTTTGGAATTTGTTGATAAAGATCTTGAGGATCTAGTGCCTATAAAGCCTCCTGCACTAGAATGCACCCCTTTCAAGCTTGTGGAGGATGTCAAAGGATTGAAGGAATTGGCTGCTAAGCTGCGTTCTGCTAAAGAATTTGCGGTGGATTTGGAACATAATCAATATCGGTCTTTCCAAGGTTTGACTTGCTTGATGCAAATCTCAACCAGGACTGAAGATTTTATCGTAGATACTTTCAAGCTTCGTGTTCATGTTGGGCCTTACCTGCGGGAAGTCTTCAAGGACCCTACAAAGAAGAAGGTCTTGCATGGAGCAGATCGAGATATTGTGTGGTTGCAACGGGATTTTGGCATATATGTCTGTAATATGTTTGACACAGGCCAGGCTTCTAGGGTGTTAAAATTGGAGAGATTTAGTTTGCAATATCTTTTGCAAAACTTCTGTGGAGTTACTGCTAACAAAGAATACCAGAATGCAGACTGGAGACAACGCCCTCTTCCTGATGTGATGCTAAGGTATGGCAGAGAAGATACACACTATCTGCTGAATATATATGATCAAATGAGGATCAAGCTATTTGCATTGTCTAAGGAATCTGAAAGTTCTGACAATCCTCTGTTGGAGGTTTACAAGCGCAGTTATGATGTCTGCATGAAGCTATATGAGAAAGAGCTTCTGACAGAAGACTCATACCTTCACATATATGGGTTGCAGGGGGCTGGTTTTAATGGTCAGCAGCTTGCCATTGTTTCGGCTCTTAATCAATGGCGGGACGTTTTTGCTCGTGCCGATGATGAGAGTACTGGCTATATATTGCCAAATAAAGTTCTTCTAGAAATTGCTAAGCAGATGCCTGTAACTATCAGCAGTCTTCGGCGGTTGTTAACATCAAGGCTCCCTTATGTTGAGCGAAATTTTGATGTCATTGTCAACATAGTTAGACATTCTATCCAGAATGCTGCTGCCTTTGAAGAAGTTGCACTACGTTTGAAAGAAGAACATGCGGCACGTTTGAAAGAGGCACATGCGGCAAGTGTAGCAAGTGTGTCAGATGGAGCACTTGTGGAAGATGAAACTGAAGCTGAAGAAAGTATTGCAATTGATAACGTCGATGCTACCTGCATTAATATCTCAGAGAATTCTCCATTTTTTTCTGATATGAAGGAGGACTATTCTAAGCATGAAGATAAAGATGGACAAGTAAAAATTAAATCCAATGGTCTCACTTCCGGTCTCCCACAGGATAGTGGAGCAAATAATCAGGGACTAAAAACCAGTATTTTTGATCGGACAGTACTGAACAATTCAGCCTCAAAACAGAAGCTTGATCTTGATGAAAAGGGCAACAAAGAGATCAAGCAAGAACAGATAAGATAG 1944 0.4501 MNVDRHLKDLSSSSKRIPSDRDFHFFRNFEEFRHPIEEIARRSQSMLDSIGAATSAWSSGVEFPADIDEAYDWVVDMNDELLSWFDESVAEVKKAREEEEFEEVEMENGLGLVRVKKESGKGKKVKSTAETTTDTTAKPKVSFHLATVRKPQEVYDIVVNNANQPFEHVWLEKSEDGQRFMHPLEKHNALEFVDKDLEDLVPIKPPALECTPFKLVEDVKGLKELAAKLRSAKEFAVDLEHNQYRSFQGLTCLMQISTRTEDFIVDTFKLRVHVGPYLREVFKDPTKKKVLHGADRDIVWLQRDFGIYVCNMFDTGQASRVLKLERFSLQYLLQNFCGVTANKEYQNADWRQRPLPDVMLRYGREDTHYLLNIYDQMRIKLFALSKESESSDNPLLEVYKRSYDVCMKLYEKELLTEDSYLHIYGLQGAGFNGQQLAIVSALNQWRDVFARADDESTGYILPNKVLLEIAKQMPVTISSLRRLLTSRLPYVERNFDVIVNIVRHSIQNAAAFEEVALRLKEEHAARLKEAHAASVASVSDGALVEDETEAEESIAIDNVDATCINISENSPFFSDMKEDYSKHEDKDGQVKIKSNGLTSGLPQDSGANNQGLKTSIFDRTVLNNSASKQKLDLDEKGNKEIKQEQIR* 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1550 647 MobiDBLite consensus disorder prediction 575 591 - -
Aev06g1550 647 Gene3D HRDC domain 418 513 IPR044876 -
Aev06g1550 647 Coils Coil 222 242 - -
Aev06g1550 647 SMART hrdc7 432 511 IPR002121 GO:0003676
Aev06g1550 647 Gene3D - 147 417 IPR036397 GO:0003676
Aev06g1550 647 ProSiteProfiles HRDC domain profile. 432 512 IPR002121 GO:0003676
Aev06g1550 647 Pfam HRDC domain 435 500 IPR002121 GO:0003676
Aev06g1550 647 MobiDBLite consensus disorder prediction 627 647 - -
Aev06g1550 647 SUPERFAMILY HRDC-like 414 507 IPR010997 GO:0000166|GO:0044237
Aev06g1550 647 PANTHER POLYMYOSITIS/SCLERODERMA AUTOANTIGEN-RELATED 1 597 IPR045092 GO:0000175|GO:0000467
Aev06g1550 647 SUPERFAMILY Ribonuclease H-like 148 412 IPR012337 -
Aev06g1550 647 MobiDBLite consensus disorder prediction 575 612 - -
Aev06g1550 647 MobiDBLite consensus disorder prediction 592 612 - -
Aev06g1550 647 CDD Rrp6p_like_exo 209 401 - -
Aev06g1550 647 Pfam 3'-5' exonuclease 215 380 IPR002562 GO:0003676|GO:0006139|GO:0008408
Aev06g1550 647 SMART 35exoneu6 213 382 IPR002562 GO:0003676|GO:0006139|GO:0008408
Aev06g1550 647 MobiDBLite consensus disorder prediction 629 647 - -
Aev06g1550 647 PANTHER 3'-5' EXONUCLEASE 1 597 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1550 Aev-Chr6 11284111 11294411 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1550 K12591 - gmx:100804872 733.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g1550 06 11284111 11294411 Aev06g1550 06 11284111 11294411 ECH