Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1546 ATGGGAACTCTTACGAGTTGCACTTTCATCCCTCTCAACTCCGAATTCCGGTCCAACCCGGTTCGTCGTGCCTTCAGGGACCGGATTCACTCTCACGTCCTCAACCGGTTCACCGCCACGTGCTCCTCCTCCTTCTCCTCCTTCTCTGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTGTTTCTTCACGCCGCACAGAACTGGTATCAAATTTTCACTGTTTCGGTGTTCTTCAGCTAGTGACAATAACAATAACAGCAACAACAATATCGATAGCGTTGATGGTGAATCTGAAAGAGGTGGAAGTAATGATTCTTCTAATGCTTCAACAACAACCACTACGCTTCCTGAAGAGAGACGCGATGATGCCTTCAATTCTGAAAAATCAACTCCCCCTTCTCCTTCTCCCAGGTCATCTTTGTCATCGCTTGGTCCTACATACAGCAATTTTCAAGTCGATTCTTTCAAACTTATGGAACTCCTTGGACCTGAGAAGGTTGATCCTGCTGATGTAAAGCTGATTAAGGATAAGCTTTTTGGTTATTCAACCTTTTGGGTAACAAAAGAGGAGCCTTTCGGAGAGTTGGGTGAAGGCATTCTTTTCATCGGAAATTTAAGGGGAAAGAGAGAGGATGTCTTTTCCAAACTTCAAAAGCTGCTAGCTGAGGTCACAGGTGATAAGTACAACCTTTTTATGGTGGAGGAGCCCAATTCAGACAGCCCTGATCCACGAGGTGGGCCGCGTGTTAGCTTTGGTTTGCTGCGGAAGGAAGTTTCTGAGCCTGGGCCAACAACACTTTGGCAATATGTCATTGCATTCTTGCTGTTTCTTCTAACTATTGGTTCCTCAGTGGAGCTAGGAATTGCGTCTCAGATCAATAGACTTCCCCCAGAAATAGTGAAATACTTTACAGATCCTGATGCAATTGAAGCCCCAGATATGGAGCTGCTATTTCCATTTGTTGATTCAGCTTTACCTTTAGCCTATGGTGTCTTAGGTGTTCTTCTGTTTCATGAAGTTGGACACTTTCTTGCAGCTTTCCCTAAACAAGTGAAATTAAGCATTCCTTTCTTTATTCCAAACATCACCCTTGGCAGCTTTGGTGCTATTACTCAGTTTAAATCCTTACTTCCTGATAGAAGTACAAAAGTGGATGTATCACTTGCGGGACCCTTTGCTGGTGCTGTGTTATCGTTTTCAATGTTTGTCGTTGGTCTTCTGCTCTCATCAAATCCAGATGCGGCAGGAGATTTGGTGCAAGTTCCTAGCTTGTTGTTTCAAGGTTCCTTGCTTCTTGGATTAATCAGTAGAGCCACTCTTGGCTATGCAGCAATGCATGCTGCAACAGTTTCAATTCACCCTCTTGTGATTGCTGGCTGGTGTGGCTTAACTATACAAGCTTTTAACATGCTTCCAGTGGGTTGCCTTGACGGTGGAAGAGCTGTTCAGGGTGCTTTTGGAAAAAGTGCACTAATGGGCTTTGGCTTGACCACTTATACATTGCTTGGATTAGGAGTGATTGGTGGACCTCTTTCACTTCCTTGGGGACTTTATGTTATATTATGTCAGAGGACACCAGAGAAACCTTGCTTAAATGATGTGACGGAGGTTGGAACATGGAGGAAGACACTTGTGGCTGTTGGTATTTTTCTTGTTGTGTTGACTCTTCTTCCTGTTTGGGATGAGCTTGCAGAGGAATTGGGTATTGGTCTTACCAATAGTATAAGGCAATATGGACTAGTCCATATTCGCAAAGACAGAAGAAGAGTGAAAACAAACACTCCTCTACTAGAACAAACGAAACCTTGCTCGTTGCTCCTCCTTCTGCTTAGTTCTTCTTCTTCTTCTTCAAGGTCTCATTCAACGATGACGAAACAGCACGCAAATTGGTCTCCCTATGACAACAATGGAGGATCTTGTGTGGCGATTGCCGGAGCTGATTACTGTGTGATCGCAGCGGATACGAGGATGTCGACCGGTTACAACATCCTCACTCGCGATTATTCCAAAATCTCCCAACTCGCTGAGAAAAGTGTTATGGCTTCCTCTGGCTTTCAAGCTGATGTTAAAGCTTTGCAGAAGGCTTTGTCTGCCAGGCATTTGATATATCAGCATCAACACAACAAGCAAATGAGCTGCCCCGCAATGGCTCAGTTGCTTTCCAATACTCTATATTACAAACGCTTCTTTCCTTATTACGCTTTCAATGTTTTGGGTGGTCTTGATAATGAAGGAAAGGGATGTGTCTTCACATATGATGCTGTTGGTTCCTATGAGAGGGTTGGATATAGCTCTCAGGGTTCTGGTTCCACACTCATTATGCCTTTTCTAGATAACCAACTGAAATCTCCCAGTCCTCTCTTATTGCCAGCCAAGGATGCTGTTACTCCGCTGTCTGAAGTAGAAGCAATTGATCTTGTGAAGACTGTTTTTGCATCTGCAGCAGAAAGAGATATATACACCGGTGATAAAGTTGAAATCGCCATACTGAATGCTAGTGGTATTCGAAGAGAATACTTGGACCTTAGGAAAGATTAA 2538 0.4381 MGTLTSCTFIPLNSEFRSNPVRRAFRDRIHSHVLNRFTATCSSSFSSFSASSSSSSSSSCFFTPHRTGIKFSLFRCSSASDNNNNSNNNIDSVDGESERGGSNDSSNASTTTTTLPEERRDDAFNSEKSTPPSPSPRSSLSSLGPTYSNFQVDSFKLMELLGPEKVDPADVKLIKDKLFGYSTFWVTKEEPFGELGEGILFIGNLRGKREDVFSKLQKLLAEVTGDKYNLFMVEEPNSDSPDPRGGPRVSFGLLRKEVSEPGPTTLWQYVIAFLLFLLTIGSSVELGIASQINRLPPEIVKYFTDPDAIEAPDMELLFPFVDSALPLAYGVLGVLLFHEVGHFLAAFPKQVKLSIPFFIPNITLGSFGAITQFKSLLPDRSTKVDVSLAGPFAGAVLSFSMFVVGLLLSSNPDAAGDLVQVPSLLFQGSLLLGLISRATLGYAAMHAATVSIHPLVIAGWCGLTIQAFNMLPVGCLDGGRAVQGAFGKSALMGFGLTTYTLLGLGVIGGPLSLPWGLYVILCQRTPEKPCLNDVTEVGTWRKTLVAVGIFLVVLTLLPVWDELAEELGIGLTNSIRQYGLVHIRKDRRRVKTNTPLLEQTKPCSLLLLLLSSSSSSSRSHSTMTKQHANWSPYDNNGGSCVAIAGADYCVIAADTRMSTGYNILTRDYSKISQLAEKSVMASSGFQADVKALQKALSARHLIYQHQHNKQMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDNEGKGCVFTYDAVGSYERVGYSSQGSGSTLIMPFLDNQLKSPSPLLLPAKDAVTPLSEVEAIDLVKTVFASAAERDIYTGDKVEIAILNASGIRREYLDLRKD* 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1546 845 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 630 845 IPR029055 -
Aev06g1546 845 MobiDBLite consensus disorder prediction 127 145 - -
Aev06g1546 845 MobiDBLite consensus disorder prediction 84 145 - -
Aev06g1546 845 CDD proteasome_beta_type_1 630 845 - -
Aev06g1546 845 Pfam Proteasome subunit 635 829 IPR001353 GO:0005839|GO:0051603
Aev06g1546 845 ProSitePatterns Proteasome beta-type subunits signature. 641 688 IPR016050 GO:0005839|GO:0051603
Aev06g1546 845 PANTHER ZINC METALLOPROTEASE EGY1 3 569 IPR044838 -
Aev06g1546 845 ProSiteProfiles Proteasome beta-type subunit profile. 637 830 IPR023333 -
Aev06g1546 845 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 631 844 IPR029055 -
Aev06g1546 845 MobiDBLite consensus disorder prediction 84 114 - -
Aev06g1546 845 CDD S2P-M50_like_2 273 521 - -
Aev06g1546 845 PANTHER ZINC METALLOPROTEASE EGY1, CHLOROPLASTIC-RELATED 3 569 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1546 Aev-Chr6 11229784 11238880 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1546 K25380 - gmx:100808073 862.833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g1546 06 11229784 11238880 Aev06g1546 06 11229784 11238880 ECH