Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1545 ATGGGGTGGTTCTCTTCTTCCACCACCACCCTATTCCTCTTCTTCTTCTTATTCTTCTCCATGTTCGCTTCCTCACTCGCCGTAGAAGATAACCACAACCCACCCCAACTTTCAGGCATTGATATTGAAAAGCCAGTTTTGAATGTCACCCCTTCCCCACTTTGGGGGCATTCAGCTACCAACGGTGTTAAGGACACTTTACTATGTGAGCGCATTAAGGTTTCTGGTATCTCAAGGCTGAAACTTGGGAGCTATGCTAGTTCATTCCACGTTTCTTTGGCTCCCTCCACTGCAATCCCAGAGCGGTTTCATAGCAAAATTCAAGTTTGTTTTCACAGGAATAATTCACGTGGATGGTGCCAATGTGAAAAGGATGAATGGAGGAGCATGCAGAAAGGCATCTGGAGTGCTGTTATGTCCCCTTATGAAACTAGATATGTTGATGTGAGGATCAATGGTCAGATGTCGGGTTCTGTTACAGTTGCTCTTGAAGAAGGTTTTCAGCAATGGCGCCTCATTTGTCTTGCAGTTGGATTGACACTGCTGTTGTTGGCTCCAATTATTAGCAGTTGGGTTCCATTTTATTATAGCAGTTCAATGGCTATTGGGATCTTCCTTGTTGTTATAATCCTTCTTTTCCAGGGGATGAAATTATTGCCAACTGGAAGAAAAAATATCTTTTACCTTACCATATATGGATCTGTGCTTGGAGCTGGGTCATTCCTTTTGCACCAATTCTCTATGTTCGTAAATTCGATTCTTCAGAGTTTAGGGATGAACGAAGAGATGCACAATCCAGTTGCGGTTTTTGTACTGCTGGGCATCATCTTGGCCGGAGCTGCTTTAGGCTACTGGATTGTTAGGAGATTTGTTATTTCAAAAGAAGATGGCACTGTGGATTCTGGGGTTGCTCAATTTGTGAAGTGGGCAATGCGCATCATAGGAATCACCTTCATTTTTCAGAGCACTATTGATCCTCCTCTAGCAATTGGAGCTTTGGTCTCTTGTGGAGCTGTTTGTAATCTTTTTTCCTCAATAAAGTGGCTTCATGGATGGTATGAAACTTCAGTTGATGATAGTTATTCAAAGCAGTGGGTGAGAGGAAAGCGTGGTCGCGCCGAATTTCTTAGCAAGTCAACATCCCCTAAAGGAAAAGTTTGGAGTAACCCTAAGAGATCTGCGTGGTCTGACTCTCCTGTCAAAGGTGTTGTATCGACGCCTTCTTCGGTCACGCCGCAATCTTCCGGGGCGCAATCAGGGAAGGACTATTACTCAACCTTCCACAAGACCCGCAACAGAAAGAGGTTCACGAAGAAAGAGTGGGATGAGTTCACACGAGACTCCACAAGGCAAGCTCTAGCAGAGTGGGCAGCGTCTCCAGAGTTCACTGACTGGATAATTGAGCATGCTGACCGGATAAAAATCCTTCCAAGTGAAAGCTCCGATGAGACGATGGGGAGTGAATCGGATTCCACGGAAATAGGAAGCGGAAATGGATTTCGACTTTTCAATTGGCAGGAACACTTGAAACGACGTCGTTTCACAACGACAAAGAAGGTGATTTTTGAAGTGAGCTTCCGAACCCTCGAGGTTGAAGTGAAAGCTCTAAAACCTCTGCAGCTCTCTCCTCTCTACTTTTTCTACCTTCCCCATTCTCCACCCGCCGCCGCCGCGGTCACCGCCGCCACTCCCTTCCCCACTAAAGCGTCGACGCCGCCTGCCACTCCTTCAAACTCCGTTCTTTCCATTGCATCCAAGTGTTTCCATTTGTGTTGTTACCCATTTGTTTATTATGCACAGCAAGCGAATGTTGGTTATGTAGCCAATGTATGCCATGTTTGGATTTTTCTAACGCATTGCTCAACATGGGCAATCTTAGCATCTAACCGGTACCTTTGGTCAGATCAGGAAAAAAGTGTACAGCCTACGAAACCCCACACCATGTTCCGTCAGATGATATTACTCTCCAGAGCCTCCTTGCAAAACCGCCACTTCTCCCAGGCTGCTGCTGTTGCCATCCTCCACCCTGAGTTGGAGCTGCCACCCCTAACTTACCTAGAAGGCTTCCCAAAGCCAGATCCCAAATATGATGAGACAATCCTCGCAATCCCTCGTTCCAATTCGGGGAAGAACATCTCTGCGAAGGAGCGGAAGGTTGGGCGTGTCCCTAGCATTGTGTTTGAGCAGGAGGATGGCCAGCATGGGGGCAACAAGCGCCTCATCTCTGTACGCACCAACCAGATCAGGAAGCTCGTCAATCACATTGGTCGCTCCTTTTTCCTCTCCCGTCTCTTTGATCTAGAAGTCAGGTCGGACTTCGAATCCGATGAGATTGTTGAGAAGGTTCGCGTTTTGCCTCGCAAGGTACATTTGCAGGCAGGCACAGACGCACCATTAAATGTCACCTTTATTAGGGCTCCATCAAATGCTCTTTTGAAAATTGACGTTCCTCTTGTATTTAGAGGAGAAGATGTATCCCCTGGATTGAAGAAAGGTGCTTATTTGAATGTCATCAAAAGGACAGTTAAGTACTTGTGCCCTGCAGACATTGTCCCTCCGTATATTGATGTCGATTTAAGCGAGTTGGATGTGGGCCAGAAGTTGGTGATGGGAGATCTCATTGTTCACCCTGCATTAAAACTTATTCAGTCTAAAGATGAACCTGTTGTTAAAATTATGGGACAAAGGGTTTCTGAACTACAAAAGAAAAAGTAA 2715 0.46 MGWFSSSTTTLFLFFFLFFSMFASSLAVEDNHNPPQLSGIDIEKPVLNVTPSPLWGHSATNGVKDTLLCERIKVSGISRLKLGSYASSFHVSLAPSTAIPERFHSKIQVCFHRNNSRGWCQCEKDEWRSMQKGIWSAVMSPYETRYVDVRINGQMSGSVTVALEEGFQQWRLICLAVGLTLLLLAPIISSWVPFYYSSSMAIGIFLVVIILLFQGMKLLPTGRKNIFYLTIYGSVLGAGSFLLHQFSMFVNSILQSLGMNEEMHNPVAVFVLLGIILAGAALGYWIVRRFVISKEDGTVDSGVAQFVKWAMRIIGITFIFQSTIDPPLAIGALVSCGAVCNLFSSIKWLHGWYETSVDDSYSKQWVRGKRGRAEFLSKSTSPKGKVWSNPKRSAWSDSPVKGVVSTPSSVTPQSSGAQSGKDYYSTFHKTRNRKRFTKKEWDEFTRDSTRQALAEWAASPEFTDWIIEHADRIKILPSESSDETMGSESDSTEIGSGNGFRLFNWQEHLKRRRFTTTKKVIFEVSFRTLEVEVKALKPLQLSPLYFFYLPHSPPAAAAVTAATPFPTKASTPPATPSNSVLSIASKCFHLCCYPFVYYAQQANVGYVANVCHVWIFLTHCSTWAILASNRYLWSDQEKSVQPTKPHTMFRQMILLSRASLQNRHFSQAAAVAILHPELELPPLTYLEGFPKPDPKYDETILAIPRSNSGKNISAKERKVGRVPSIVFEQEDGQHGGNKRLISVRTNQIRKLVNHIGRSFFLSRLFDLEVRSDFESDEIVEKVRVLPRKVHLQAGTDAPLNVTFIRAPSNALLKIDVPLVFRGEDVSPGLKKGAYLNVIKRTVKYLCPADIVPPYIDVDLSELDVGQKLVMGDLIVHPALKLIQSKDEPVVKIMGQRVSELQKKK* 905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1545 904 SUPERFAMILY Ribosomal protein L25-like 704 894 IPR011035 GO:0006412
Aev06g1545 904 Pfam NEMP family 161 430 IPR019358 -
Aev06g1545 904 Gene3D Ribosomal Protein L25; Chain P 699 806 IPR020056 -
Aev06g1545 904 PANTHER TRANSMEMBRANE PROTEIN (DUF2215) 12 494 - -
Aev06g1545 904 CDD Ribosomal_L25_TL5_CTC 699 805 IPR029751 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Aev06g1545 904 Pfam Ribosomal L25p family 702 803 IPR029751 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Aev06g1545 904 MobiDBLite consensus disorder prediction 381 423 - -
Aev06g1545 904 PANTHER EXPRESSED PROTEIN 12 494 - -
Aev06g1545 904 MobiDBLite consensus disorder prediction 379 423 - -
Aev06g1545 904 Pfam Ribosomal protein TL5, C-terminal domain 813 894 IPR020057 -
Aev06g1545 904 Gene3D Ribosomal protein L25, beta domain 809 901 IPR037121 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1545 Aev-Chr6 11218855 11227804 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1545 - - gmx:100808605 747.273